KEGG   Kosakonia pseudosacchari: IP581_01215
Entry
IP581_01215       CDS       T06897                                 
Symbol
hupA
Name
(GenBank) DNA-binding protein HU-alpha
  KO
K05787  DNA-binding protein HU-alpha
Organism
kpse  Kosakonia pseudosacchari
Brite
KEGG Orthology (KO) [BR:kpse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kpse03032]
    IP581_01215 (hupA)
   03036 Chromosome and associated proteins [BR:kpse03036]
    IP581_01215 (hupA)
   03400 DNA repair and recombination proteins [BR:kpse03400]
    IP581_01215 (hupA)
DNA replication proteins [BR:kpse03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    IP581_01215 (hupA)
Chromosome and associated proteins [BR:kpse03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    IP581_01215 (hupA)
DNA repair and recombination proteins [BR:kpse03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      IP581_01215 (hupA)
SSDB
Motif
Pfam: Bac_DNA_binding HU-HIG HU-CCDC81_bac_2 HU-CCDC81_euk_2 HU-CCDC81_euk_1 DUF2267
Other DBs
NCBI-ProteinID: QOV64335
LinkDB
Position
254189..254461
AA seq 90 aa
MNKTQLIDVIADKADLSKAQAKAALESTLAAVTESLKAGDAVQLVGFGTFKVNHRAERTG
RNPQTGKEIKIAAANVPAFVSGKALKDAVK
NT seq 273 nt   +upstreamnt  +downstreamnt
atgaacaagactcaactgattgatgtaattgcagacaaggctgatctgtctaaagcgcaa
gcgaaagctgcactggaatccaccctggctgccgttactgagtctctgaaagcaggtgat
gcggtacaactggttggtttcggtaccttcaaagtgaaccaccgcgctgagcgtactggc
cgcaacccgcagaccggtaaagaaatcaaaatcgccgcagctaacgtgccggcatttgtt
tctggtaaagcactgaaagacgcagttaagtaa

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