Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1: VK055_1368
Help
Entry
VK055_1368 CDS
T03418
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
kpt
Klebsiella pneumoniae subsp. pneumoniae ATCC 43816 KPPR1
Pathway
kpt03030
DNA replication
kpt03430
Mismatch repair
kpt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kpt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VK055_1368 (holB)
03430 Mismatch repair
VK055_1368 (holB)
03440 Homologous recombination
VK055_1368 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kpt03032
]
VK055_1368 (holB)
03400 DNA repair and recombination proteins [BR:
kpt03400
]
VK055_1368 (holB)
Enzymes [BR:
kpt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VK055_1368 (holB)
DNA replication proteins [BR:
kpt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VK055_1368 (holB)
DNA repair and recombination proteins [BR:
kpt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VK055_1368 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
AIK79991
LinkDB
All DBs
Position
complement(1364948..1365952)
Genome browser
AA seq
334 aa
AA seq
DB search
MKWYPWLRPSFEQLVGSYQAGRGHHALLLQSLNGMGGEALIYALCRFLMCRQPEGHKSCG
HCHSCQLMQAGTHPDYYALSPEKGKSALGIDAVRDVNEKLYEHARLGGAKVVWISDAALL
TDAAANALLKTLEEPPENTWFFLACEEPARLLTTLRSRCRLHHLAPPSEPYALAWLEREV
SLPQESLLTALRLCASAPAAALELLQEPLWTARQQLCQALAATLASGDWLALLPILNHEQ
AAVRLHWLASLLVDAQKRQQGITLVSNPDVWPLLEQLAHSLPAARLQAIAHDVCTCREQL
LNVVGVNRELLLTERLLRWEHYLQPGTVLPVSHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaaatggtatccgtggctgcgcccctcgttcgagcaactggtcggtagctatcaggcc
ggacgaggccaccacgccttactgttacagtccctgaacgggatgggcggcgaggcgttg
atttacgcgctgtgccgcttcctgatgtgccgccagcccgaaggacataaaagctgcggc
cactgccatagctgtcagctgatgcaggccggcacgcaccccgattactatgcgctcagc
cccgagaagggcaagagcgcgctgggtattgacgcggtgcgcgatgtcaatgaaaagctc
tatgaacatgcgcgccttggtggggcaaaagtggtctggattagcgatgctgccttgctg
accgatgccgccgccaacgcgttgctgaaaacgctggaggagcccccggagaatacctgg
ttcttcctcgcctgcgaggagccggcgcgtctgctgaccactctgcgcagccgctgtcgc
ctgcatcatctggcgccgccgtctgagccttatgctctggcctggctggagcgtgaggtg
agcctgccgcaggagtcattgttgaccgcgttacgcctgtgcgccagcgcgccggctgcg
gcgctcgaactgttacaggaaccgctgtggacggcgcggcagcagttgtgtcaggcgctg
gcggctaccctggcgagcggtgactggctggcgctgctgccgatactcaatcatgaacag
gcggcggttcgcctgcactggctggcgtcgctgctggtcgatgcgcaaaaacgacagcag
gggattaccctggtgagtaaccctgacgtctggccgctgctggagcagctggcgcacagc
ctgcccgccgcccggctgcaggcgattgcccatgacgtctgtacctgccgcgagcaattg
ctcaacgttgtcggtgtcaaccgcgaactgctgcttaccgagcgcctgctgcgctgggaa
cattacctgcaacccgggacggttttacccgtctcccacctctga
DBGET
integrated database retrieval system
