Kosakonia sacchari: C813_05475
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Entry
C813_05475 CDS
T03601
Name
(GenBank) peptigoglycan-binding protein LysM
KO
K19236
L,D-transpeptidase YcfS
Organism
ksa
Kosakonia sacchari
Pathway
ksa01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ksa00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
C813_05475
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ksa01002
]
C813_05475
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ksa01011
]
C813_05475
Peptidases and inhibitors [BR:
ksa01002
]
Cysteine peptidases
Family C82
C813_05475
Peptidoglycan biosynthesis and degradation proteins [BR:
ksa01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
C813_05475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AHJ74260
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Position
2877962..2878921
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AA seq
319 aa
AA seq
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MIKMSRFVHWLALLAATVALALPARANTWPLPPSGSNLVGENRFHVVQNDGGSLEAIAKQ
YNVGFLALLQANPGIDPYVPRAGSVLTIPLQTLLPDVPRKGIVINLAELRLYYYPPGKNE
VTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGINLPAVMPAGPDN
PMGHHAIRLAAFGGVYLLHGTNADFGIGMRVSSGCIRLRDKDISNLFAQVSPGTPVNIIN
TPIKASVEPDGRRLVEVHQPLSKSINDDPKTLPIVLNAAMQAFKDDARSDAAVMSHAMEV
RSGMPVDINRHIENVSQVM
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatgtcgcgtttcgttcactggctcgcgctgctggccgccactgtcgctctc
gccctacccgcacgcgctaatacctggcctttacccccttccggcagtaacctcgttggc
gagaaccgttttcatgtcgtgcagaatgacggcggttcactggaggcgattgctaagcaa
tataatgtggggttccttgcgcttttgcaggccaaccccggtatcgatccgtatgtcccg
cgcgcgggcagcgtcctgactattccgctgcaaacgctgctgcccgatgtgccgcgcaaa
ggcattgtgatcaacctcgccgagttgcgcctctattactatccgccaggtaaaaacgaa
gtcacggtttacccaatcggcattggccaactgggtggcgacacgctgacgcccaccatg
gtcaccacggtttctgataaacgcgcgaaccccacctggacaccgaccgcgaatattcgc
gcgcgctataaagcacagggaataaatcttcccgcagtgatgcctgccgggccggataac
ccgatgggacaccacgccattcgccttgccgcgtttggtggcgtctatttgctgcacggc
actaacgccgatttcggtattggtatgcgcgttagctccggctgcattcgcctgcgtgac
aaagacatttctaatctgtttgcccaggtttccccgggtacgccagtgaatatcatcaat
acgccgatcaaagcgtcagttgaacccgatggcagacggctggttgaagtgcatcagccg
ctatcgaaatcgattaacgatgatcctaaaacgttacccatcgtgctgaacgccgcgatg
caagcgttcaaagatgatgcgcgcagcgatgcagcagtgatgagccatgcgatggaagtg
cgttccgggatgccggtcgatatcaaccgccatattgaaaatgtgtcgcaggtgatgtaa
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