Kocuria varians: CIB50_0002233
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Entry
CIB50_0002233 CDS
T06882
Symbol
sigR
Name
(GenBank) ECF RNA polymerase sigma factor SigR
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvr03021
]
CIB50_0002233 (sigR)
Transcription machinery [BR:
kvr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CIB50_0002233 (sigR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
MlaC
DUF2802
Motif
Other DBs
NCBI-ProteinID:
QMS57489
UniProt:
A0A7D7L236
LinkDB
All DBs
Position
complement(2556999..2557706)
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AA seq
235 aa
AA seq
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MPVATLDLGTMNDQRSQDSRAVDHPEEVPAGEESTQQRRERFERDAMQYVDQLYAAALRM
ARNPSDAEDLVQEAYTKAFSAFHQYKPGTNLKAWLYRILTNTYINLYRKRQREPRQANTD
AVEDWQLHRAESHTSTGLRSAEVEALDHLPDSDVKRALQELPEEFRLAVYFSDVEGFAYK
EISEIMDTPIGTVMSRLHRGRKLLREKLGDYAQERGFDTSRARKGKDGAPAKDRG
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atgccggtcgcgaccctagacttgggaacgatgaacgatcagcgaagtcaagactcccgt
gccgtggaccacccggaggaagtgcccgccggggaggagtccacgcagcagcggcgcgaa
cggttcgagcgcgacgccatgcagtacgtggaccagctctacgccgccgcgctgcgcatg
gcgcgcaacccctccgatgccgaggacctggtgcaggaggcctacaccaaggcgttctcc
gcgttccaccagtacaagcccgggaccaacctcaaggcctggctgtaccggatcctcacg
aatacctacatcaacctgtaccgcaagaggcagcgcgaaccgcgccaggccaacacggac
gcggtggaggactggcagctgcaccgcgcggagtcgcacacctccacaggtctgcgctcc
gccgaggtcgaggcgctggaccacctgccggactcggacgtcaagcgggcgctgcaggag
ctgcccgaggagttccgcctggcggtctacttctccgacgtggaggggttcgcgtacaag
gagatctccgagatcatggacacgcccatcggcaccgtgatgtcccggctgcaccgaggg
cgcaagctcctgcgcgagaaactgggcgactacgcccaggaacgaggatttgacacgtcc
agggcccgcaagggcaaggacggcgcaccagcgaaggatcgaggctga
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