Lysobacter antibioticus 76: LA76x_4084
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Entry
LA76x_4084 CDS
T04154
Symbol
mrcB
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
lab
Lysobacter antibioticus 76
Pathway
lab00550
Peptidoglycan biosynthesis
lab01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
LA76x_4084 (mrcB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lab01003
]
LA76x_4084 (mrcB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lab01011
]
LA76x_4084 (mrcB)
Enzymes [BR:
lab01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
LA76x_4084 (mrcB)
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
LA76x_4084 (mrcB)
Glycosyltransferases [BR:
lab01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
LA76x_4084 (mrcB)
Peptidoglycan biosynthesis and degradation proteins [BR:
lab01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
LA76x_4084 (mrcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
UB2H
Transpeptidase
Slp
Motif
Other DBs
NCBI-ProteinID:
ALN82200
UniProt:
A0A0S2FF86
LinkDB
All DBs
Position
complement(4655321..4657732)
Genome browser
AA seq
803 aa
AA seq
DB search
MARIDYDEDELDNDGNDGDGHAPTWRRRLVTWALAAIGLGLGFLIPYTLYLNHEVGQRFG
QLRWQIPTRVYARPLELAPGLALDPGTLKTELDAASYREDSGERPGTYARQGGRFTVASR
GFNDVDGAVPARRIEVVVSGGRVASLRDLTSRKSLKTARLDPARIATLYGQKQEERRLVR
IEEVPELLVTGLQAVEDRDFAHHMGIDLSGMARAAFKNVAAGRAKQGASTLTQQLARSGL
LGIGQEQTLTRKGKEIIYALLMEARYDKRTILEAYFNQVYLGQRGSQAIHGVAAASEFWF
GRDLRDLNTEQIALLIGIVRGPSYYDPRRNPERALERRNFVLGEMHETQLIDDKEFQRAL
KTPLGITSNPGSVAANRFPAYVDLVRRQLARDYPADALAGAGLSVMSGMSPSAQAQAEGA
VARTLKSLDSKRRPPLQAGLVVTDVHNGEVVAVVGSREFSEHGFNRAVEAQRPVGSLLKP
FVYLLALAQPNEFNLASWVDDSPVTVKLGRGRNWNPGNSDGRSHGLVRMIDALAMSYNQA
TVRIGMKVAPERVADLIKTLAGIEAPNNPSLILGAVDQSPYAMAQLYQFLASGGEIQPLH
AVRGVLGSDGKTVKRYDKEPAPAQEGDAIAARLITIALQQAVSNGTGRQLIGDGLGRLSP
AGKTGTSNDGRDSWFAGWTGDHLAVIWVGNDQNQTTGLYGATGAMRVWSAIFSRLPTAPL
KVTDKGLDWQAVIGTHTTDASCVGARRFPFVAGFAPEYAPCPAPQAEGEASGGGWREWFG
IGKDKEEPAREPAPSPDSPPPEQ
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
gtggcccgaatcgattacgacgaagacgagctcgacaacgacggtaatgacggcgacggc
catgcgccgacctggcgccgccgactggtgacctgggccctggccgcgattggcctgggg
ctcggtttcctgattccgtacacgctctatctcaatcacgaggtcggccagcgcttcggt
cagttgcgttggcagattccgacccgggtctatgcgcgtccgctcgaactggcgccgggc
ctggccctggacccgggcacgctgaagaccgaactcgacgccgcctcctaccgcgaggac
agcggcgagcgccccggtacctatgcccgccagggcggccgcttcactgtcgccagccgc
ggtttcaacgatgtcgacggcgccgtgccggcgcggcgcatcgaagtcgtggtgtccggc
ggccgagtcgccagcctgcgcgacctgacctcgcgcaagtcgctgaagaccgcgcgcctg
gacccggcgcgcatcgccacgctgtacgggcaaaagcaggaagaacgccgcctggtgcgg
atcgaggaagtgcccgagttgctggtcaccggcctgcaggccgtcgaggaccgcgacttc
gcccatcacatgggcatcgacctcagcggcatggcgcgtgcggcgttcaagaacgtcgcc
gccggccgcgccaaacagggcgccagcaccctgacccagcagctcgcgcgcagcggcctg
ctcggcatcggccaggaacagaccctgacccgcaagggcaaggaaatcatctacgccctg
ttgatggaggcgcgttacgacaagcgcaccatcctcgaggcgtatttcaaccaggtctat
ctcggccagcgcggctcgcaggccatccacggcgtcgccgcggcctccgagttctggttc
ggccgcgacctgcgcgacctcaacaccgaacagatcgcgttgctgatcggcatcgtgcgc
ggcccgtcctactacgacccgcggcgcaatcccgagcgcgcgctggagcgccgcaatttc
gtcctcggcgagatgcacgagacccagctgatcgacgacaaggaattccagcgcgcactg
aagacgccgctcggcatcacctccaaccccggcagcgtcgccgccaatcgtttcccggcg
tatgtcgacctggtccgccgccaactcgcgcgcgactacccggccgatgcgctcgccggc
gccggcctgagcgtgatgagcggcatgtcgccgtcggcgcaggcgcaggccgaaggcgcg
gtcgcgcgcaccctcaagagcctggacagcaagcgccgcccgccgttgcaggccggcttg
gtcgtcaccgatgtgcacaacggcgaagtcgtggccgtggtcggcagccgcgagttctcc
gagcacggtttcaatcgcgcggtcgaagcgcagcgcccggtcggctcgctgttgaaaccg
ttcgtgtacctgctggcgttggcgcagccgaacgagttcaacctggcctcatgggtcgac
gactcgccggtcacggtcaagctcggccgcggccgcaactggaaccccggtaattccgac
ggccgcagccatggcctggtgcgcatgatcgatgcgctggccatgtcctataaccaggcc
acggtgcgcatcggcatgaaggtcgcgccggaacgcgtcgccgacctgatcaagaccctg
gccggcatcgaagcgccgaacaacccctcgttgatcctcggtgcggtcgaccagagcccg
tacgcgatggcgcagctgtaccagttcctcgcctcgggcggcgaaatccagcccctgcat
gcggtacgcggcgtgctcggcagcgacggcaagacggtcaagcgttacgacaaggaaccg
gccccggcgcaggaaggcgacgcgatcgccgcgcgcctgatcaccatcgccctgcaacag
gcggtcagcaacggcaccggccggcagttgatcggcgacggcctcggccgcctctcgccc
gcgggcaagacaggcaccagcaacgacggccgcgacagctggttcgccggctggaccggc
gatcacctggcggtgatctgggtcggcaacgaccagaaccagaccaccggcctgtacggg
gcgaccggtgcgatgcgggtgtggtcggcgatcttctcgcgcctgccgaccgcgccgctc
aaggtcaccgacaagggcctggattggcaggcggtgatcggcacccacaccaccgacgcg
agttgcgtcggcgcgcgccgcttcccgttcgtggccggcttcgcgccggaatacgcgccg
tgcccggcgccgcaggctgaaggcgaagcctccggcggcggttggcgcgagtggttcggc
atcggcaaggacaaggaagaacctgcgcgcgaaccggcgccgtctcccgattccccgccc
ccggagcagtaa
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