Labrenzia sp. PHM005: FJ695_07750
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Entry
FJ695_07750 CDS
T06152
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
labp03021
]
FJ695_07750 (rpoH)
Transcription machinery [BR:
labp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FJ695_07750 (rpoH)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
HTH_11
Sigma70_r3
GntR
Motif
Other DBs
NCBI-ProteinID:
QDG75758
UniProt:
A0A4Y6RRR6
LinkDB
All DBs
Position
complement(1700470..1701357)
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AA seq
295 aa
AA seq
DB search
MAQNLPTLTAGEGGLSRYLDEIRKFPMLQPQEEYMLAKRYKEHEDPQAAERLVNSHLRLV
AKIAMGYRGYGLPIGEVVSEGNVGLMQAVKRFEPDKGFRLATYAMWWIKAAIQEYILRSW
SLVKMGTTANQKRLFFNLRRLKGKIQALDEGDLKPHQVKEIATRLGVSEDEVVSMNRRLG
GDASLNAPIRAEADAGEWQDWLVDESDSQETLLANQEELDMRRKMLSDAMSVLNERERRI
FEARRLSEDPMTLEDLSGEFGVSRERVRQIEVRAFEKVQKAVRSSARTMEPQPVA
NT seq
888 nt
NT seq
+upstream
nt +downstream
nt
atggcccaaaatttaccgacgctcaccgcaggtgaaggtggtctcagccgatatctggat
gagattcgcaagtttccgatgctccagccgcaggaagagtacatgctcgccaagcgctac
aaagagcatgaggatccgcaggctgccgaacgtctggtcaattcacacctgcgcctcgtc
gccaaaatcgctatgggttaccgtggctacggattgccgatcggcgaagtcgtgtcagag
ggcaatgtcggcctgatgcaggcggtcaaacgttttgagccggacaaaggattccgtttg
gcgacatacgccatgtggtggatcaaggcagcgatccaagagtacatcctgcggtcctgg
tccctggtcaaaatgggcacgaccgccaaccagaaacggttgttcttcaatctccgccgc
ctgaaaggcaaaatccaggccctggacgaaggcgatctgaaaccgcatcaggtcaaggag
atagccacccgtcttggcgtgtctgaggacgaagtggtgtcgatgaaccggcgcctcggc
ggcgatgccagcctcaacgcaccgatccgggccgaagccgatgccggcgaatggcaggat
tggctggtggacgaaagcgacagccaagaaactctgctcgccaaccaggaagagctggac
atgcgccggaagatgctcagcgatgccatgagcgtcttgaatgagcgagagcgccgcatc
ttcgaagcccgccgtctgtctgaagatccaatgaccctggaagatctttccggtgaattc
ggtgtcagccgcgagcgtgtccgccagatcgaggtccgcgccttcgaaaaggtccaaaag
gctgtccgcagcagcgcgcggacgatggaaccacagccggtcgcttaa
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