Labrenzia sp. PHM005: FJ695_23790
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Entry
FJ695_23790 CDS
T06152
Name
(GenBank) DUF853 family protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
labp
Labrenzia sp. PHM005
Brite
KEGG Orthology (KO) [BR:
labp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
labp03400
]
FJ695_23790
DNA repair and recombination proteins [BR:
labp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
FJ695_23790
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_10
ResIII
AAA_30
TrwB_AAD_bind
Zot
Hydrolase
nSTAND3
T2SSE
AAA_7
Motif
Other DBs
NCBI-ProteinID:
QDG78642
UniProt:
A0A4Y6RZX9
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Position
5250491..5252050
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AA seq
519 aa
AA seq
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MSKDSQIFVGFSGKDETLSLKLANRHGLIAGATGTGKTVSLQILAEGFSKAGVPVFCSDI
KGDLSGLASAGKSKDFLEKRAKDVGIGKTYAYEAVPTAFWDLLGEQGHPIRTTVSEIGPL
LLARLLELNDTQEGVLNVLFELADDEGLLLLDLKDLRAMLTHVAERSSELSTIYGNVSKA
SIGAIQRRLLVLERQGGDNFFGEPALDIRDFIRTAPDGRGLVNILAADKLMTAPRLYAVF
LLWLLSELFEELPEVGDPDKPKLVFFFDEAHLLFNGAPKALLEKVEQVVRLIRSKGVGVY
FVTQNPLDIPETVLAQLGNRIQHALRAFTPRDQKAVRAAAETFRPNPDLNTERVITELGV
GEALVSTLEGKGIPSIVQRTLIRPPTSKLGPVTKADRRSLIQSSPVFGLYERQKDRVSAY
EVLLSRADETQRLEKKQTQKDDKYADKHGEPRRTRTGFQLPDFGRDDRPRRDSRARRTKR
RSQRDTAFEAGLKSAARSFGSSLGRALVRGLMGSLKRGN
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
gtgagtaaagacagtcagattttcgtcggtttcagcggcaaggacgaaacactttcctta
aaactggccaatcggcacggcttgatcgccggggccaccggcaccggcaaaaccgtttcc
cttcaaatcctggccgaagggttttccaaagccggtgttccggttttttgctccgatatc
aagggcgatctctccggcctggcgtcggccggcaagtccaaggattttctggaaaaacgc
gccaaagacgtcggtatcggcaaaacctacgcctatgaagcggtccccaccgctttttgg
gacctgcttggcgaacagggccatccgatccgcaccaccgtctcggaaatcggtcctttg
ttgctcgcgcgcctattggaactcaatgatacgcaagaaggcgttctgaacgtcttgttc
gaacttgccgatgatgaaggcctgctgctgctcgatctgaaagacctccgcgccatgctc
acgcatgtggctgaacggtcttctgaactttccaccatctacggcaatgtttccaaagct
tcgatcggtgccattcagcgccgcctactggtactggaacgccagggcggcgacaacttc
ttcggtgaaccggcgctcgacatccgcgatttcatccgcaccgcaccggacggacgcggc
ctggtcaacattctggccgcagacaaactgatgaccgcgccgcgcctttatgcggttttc
ctgctgtggctcttgtcagaactctttgaagagcttcccgaagtgggcgacccggacaaa
cccaagctggtgtttttctttgatgaggcccacttgctgtttaacggcgcgccgaaagca
cttctggaaaaagtggagcaggtcgtccgcctgatccgctccaaaggtgttggcgtctat
tttgtcacgcaaaacccgctcgacatccccgaaaccgtgctggcccagctcggcaatcgc
atccagcatgccctcagagctttcactcctagagatcagaaggcagtccgcgcggcagct
gaaaccttccggcccaatccggatctcaacaccgaacgggtcatcaccgagcttggtgtt
ggcgaagcgctggtttcgacactggaaggcaaaggcatcccgtccattgtccagcgcacc
ttgatccgcccgccaacgtccaaacttggccccgtgaccaaggccgaccggcggagcctg
atccagtccagtccggtttttgggctctatgagcgtcaaaaagaccgtgtctccgcctat
gaagtcctgttgagccgggctgatgaaacccagcggctggagaaaaaacagacgcaaaag
gatgacaaatacgcggacaaacatggcgaaccgcggcgcacgcgaaccggttttcaattg
ccggattttggccgcgatgaccggccgcgccgggatagccgcgcgcggcggaccaaacgg
cgcagccagcgcgacacggccttcgaggccggtttaaaatcggccgcccgcagcttcggc
tcgtcccttggacgggccctcgtgcgcgggcttatgggatccttgaaacgcggaaactaa
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