Labrenzia sp. THAF35: FIU93_07670
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Entry
FIU93_07670 CDS
T06351
Name
(GenBank) 2',5' RNA ligase family
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
labt
Labrenzia sp. THAF35
Brite
KEGG Orthology (KO) [BR:
labt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
labt03016
]
FIU93_07670
Enzymes [BR:
labt01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FIU93_07670
Transfer RNA biogenesis [BR:
labt03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FIU93_07670
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
NUFIP1
Motif
Other DBs
NCBI-ProteinID:
QFT66651
UniProt:
A0A9X7NK93
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All DBs
Position
1646522..1647058
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AA seq
178 aa
AA seq
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MPRLFTGLEIPSQTALMLSMLRGGLRGARWIDPENYHITLRFIGDIDDRTADEIAAALDR
VRRDPVEIRLNGLGSFGNGKPHAVWARVEPTAQLAELQAEQERIIQRLHLPAERRKYVPH
VTLARCRTSTNEDVAKWLSERGNFQAQPFIAGRFVLFSAKSSVGGGPYLVEEAYPLAA
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgcctatttacaggccttgagattccgtcccagacggcactcatgctttcgatg
ctccggggaggccttcggggcgcccgctggattgatccggagaactaccacatcaccttg
cgcttcattggcgacatcgacgaccgtacggccgacgagatcgccgccgcgcttgatcgt
gtccgcagggatccggtggaaatccgcctcaacggacttggttctttcggcaacggcaag
ccgcatgcggtctgggcccgggttgagccgaccgctcaacttgccgaattgcaggccgag
caggaacgcatcatccagcgtctgcatctgccggccgagcggcgcaagtatgttccgcac
gtcacccttgcccgttgcaggacctcgaccaacgaggacgtggccaagtggctaagcgag
cgcggcaacttccaggcgcagcccttcattgccggacgttttgtgctgttctcggcgaaa
tcaagtgtcggtggcggcccctatctggtggaagaggcctatccgctggccgcgtga
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