Ligilactobacillus acidipiscis: LAC1533_1168
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Entry
LAC1533_1168 CDS
T05349
Name
(GenBank) Endonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LAC1533_1168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1168
Enzymes [BR:
laca01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
LAC1533_1168
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
LAC1533_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
SFV40588
UniProt:
A0A1K1KP34
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All DBs
Position
I:1281261..1282163
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AA seq
300 aa
AA seq
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MLLGCHVSMRGQEMLLGSAKQAVNYGANTFMIYTGAPQNTKRKDIDEMNIPLAHRYMQEH
RLTSIVVHAPYIINLGNTTKPAKFDFAVQFLRGEIKRASALGAKQITLHPGSHVGAGTDQ
AIKSIAKGLDEALLLDDDVQIALETMAGKGTEVGRSFEEIAQIIDLSQMSEHLSVTLDTC
HANDAGYDIERDFDGVLNEFDHVIGLDKLKVVHVNDSKNEQGTHKDRHENIGCGKIGFTA
LNNVVHHPQLTDIPKILETPFVGPDKKHKYAPYGYEIKMFKKQEFEPELKDMIYQTQGIV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgttgttaggatgtcatgtcagcatgcgtggacaagagatgctgttagggtcggccaaa
caggcagtcaattatggagctaatacatttatgatctatacgggagctccacaaaatact
aagcgtaaagatattgatgaaatgaatattcctcttgcgcaccgatatatgcaagaacat
cgtttgacaagcattgttgttcatgcaccctatataattaatctgggaaataccacaaag
cccgctaaatttgactttgcggtgcaatttttacgtggtgaaattaagcgagcttctgcg
ttaggtgccaaacagatcactttacatcctggtagtcatgttggggctggtactgatcag
gcaattaaaagcattgcaaaaggtctagatgaagctttgctgttggatgatgatgtgcag
attgctttagaaacgatggctggtaagggaactgaagtgggccgctcttttgaagaaatt
gcccaaattattgatcttagccagatgagtgagcacttgtcagtgacgcttgatacttgt
cacgctaatgatgcaggttatgacattgaacgcgattttgatggagtattgaacgaattt
gaccatgtgattggcttagataagctaaaagtggttcatgttaatgactctaaaaatgag
cagggtacgcataaagatcgccacgaaaatattggttgcgggaagatcggttttactgca
ttgaataatgtagtacatcatccgcaattaactgatattcctaaaatattagaaacacca
tttgttggtcccgataaaaagcataagtatgcgccgtacggttatgagatcaaaatgttt
aagaaacaagaatttgagccggagttaaaagatatgatctaccagactcaaggaattgtt
taa
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