Lachnoclostridium sp. YL32: A4V08_01575
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Entry
A4V08_01575 CDS
T04430
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy03030
DNA replication
lacy03410
Base excision repair
lacy03420
Nucleotide excision repair
lacy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A4V08_01575
03410 Base excision repair
A4V08_01575
03420 Nucleotide excision repair
A4V08_01575
03440 Homologous recombination
A4V08_01575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lacy03032
]
A4V08_01575
03400 DNA repair and recombination proteins [BR:
lacy03400
]
A4V08_01575
Enzymes [BR:
lacy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A4V08_01575
DNA replication proteins [BR:
lacy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
A4V08_01575
DNA repair and recombination proteins [BR:
lacy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
A4V08_01575
NER (nucleotide excision repair)
GGR (global genome repair) factors
A4V08_01575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ANU44703
LinkDB
All DBs
Position
complement(482276..485083)
Genome browser
AA seq
935 aa
AA seq
DB search
MDKLVLIDGHSIMNRAFYGVPDLTNSEGLHTNAVYGFLNIMLKILEEEKADHAAVAFDLK
EPTFRHEMYDAYKGTRKPMPQELHEQIPVMKDVLKAMGIPIMTLEGFEADDILGTVAKRC
QAQGIQVSVVSGDRDLLQLADEHIKIRIPRTSRGVTEIKDYFPEDVLREYQVTPEEFIDV
KALMGDASDNIPGVPSIGEKTATSIIAQYKSIENAYAHLEELKPPRARKALEEHYGMAQM
SKKLAAICTDCPVEFNYGDARIGDLYTPEAYQYMKRLEFKSILARFDKTAAQEAAAPDIK
SHFTLVKDVRTADKIFGRAAGAELAGFQLILGSDGALKESVGQLSFSFDENGEVKAGKKA
RAGLNPVTGLALCLGEKDIYCLAAGEQITGEYLLERLWALCRKNRSQGNQDQNNQGQDNQ
DQDNHGVKEFWALDLKSMLAYLELKDTDPVYDAGVAGYLLNPLKDTYAYDDLARDYLGLT
VPSRADLLAKEDLGDALWRGEKNAVDCVCYMGYTAWKAAVPLAGQLKDTGMYSLYTDIEM
PLIHSLFHMEQEGVKVERAELKEYGDRLKVGIAKLEQEIYQETGHEFNINSPKQLGEILF
EQMELPGGKKTKTGYSTAADVLEKLAPDYPVVQKILDYRQLTKLNSTYAEGLAAYIGEDG
RIHGKFNQTITATGRISSTEPNLQNIPVRMALGREIRKVFVPKEGCVFVDADYSQIELRI
LAHMSGDERLIEAYRSAQDIHAITASQVFHVPLDEVTPLQRRNAKAVNFGIVYGISAFGL
SEGLSISRKEAVEYIDKYFETYPGVKIFLDGLVKQGKERGYVTTLYGRRRPIPELKSANF
MQRQFGERVAMNSPIQGTAADVMKIAMIAVDRELKKRNLKSRIVLQIHDELLIETAQDEI
RTVKNILTDKMKHAADLRVSLEVEAEVGKSWFDAK
NT seq
2808 nt
NT seq
+upstream
nt +downstream
nt
atggataaattggttttgattgatggacacagtattatgaaccgggcattttacggggta
ccggaccttacgaattcggagggtctgcataccaacgcagtgtacggttttttaaatatc
atgctgaagatattggaggaggaaaaggcggaccacgcagccgttgcctttgacctaaag
gagcctaccttccggcatgagatgtatgacgcctataaggggacgagaaagcccatgccc
caggagcttcatgagcagattcctgtgatgaaggatgtgctgaaggccatgggaattccc
atcatgaccctggagggatttgaggcggacgatatactgggaaccgtggcaaagcggtgt
caggcccagggtatccaggtatccgtggtatcaggggacagggatcttctgcagctggct
gatgaacacattaagatacggatccccagaaccagcaggggcgtgactgagattaaggac
tatttcccggaggatgtgctgcgggagtatcaggtgacgcctgaggaattcattgatgtg
aaggcccttatgggggatgcctctgacaatataccgggcgtgccttccatcggggagaaa
acagcaaccagtatcatcgcccagtacaagtccatagagaacgcctatgcccatctggag
gagcttaagcctcccagggccagaaaggccctggaggagcattacggcatggctcagatg
agcaagaagctggcagccatctgtacggactgtcctgtggaatttaattacggggacgcc
cggattggggatctgtatactccggaggcttaccagtatatgaagcgtctggaattcaag
tccatcctggcccggtttgacaaaaccgctgcccaggaagccgctgcacctgatataaaa
tcccatttcacccttgtgaaggatgtaaggacagcggataagatatttggcagggcagca
ggcgcagaactggcaggcttccagctcatactgggcagcgacggggctttaaaggagagc
gtggggcagctgtccttcagctttgacgagaacggagaagtgaaagcgggaaaaaaggcc
agagccgggctgaatcccgtgacaggcctggccttatgcctgggcgagaaggatatatac
tgtctggcggcaggggaacagattaccggtgaatatcttctggagcggctctgggcgctg
tgcaggaaaaacaggagccagggtaaccaggaccagaataatcagggccaggataaccag
gaccaggataatcatggcgttaaggagttctgggcgctggatttaaaatccatgcttgcg
tacctggaacttaaggacacggatcctgtatatgacgcgggagtggccggatatcttctg
aacccccttaaggatacctatgcctacgatgatctggccagggactatctgggacttacc
gtgccctccagggcggacctgctggcaaaggaggacctgggagatgccctgtggaggggt
gagaagaatgccgttgactgtgtatgctacatggggtacactgcgtggaaggccgctgta
cccctggcaggacagttaaaggataccggaatgtacagcctgtatacagatatagagatg
cccctgattcacagccttttccatatggagcaggagggcgtgaaggtggaacgggctgag
cttaaagaatatggggacaggcttaaggtgggaatcgccaagctggaacaggaaatctac
caggagacaggccacgagttcaatatcaactcccccaagcagctgggagagattctcttt
gagcagatggagcttccgggaggaaaaaagacaaagacaggttattccacggcagcggat
gtgctggaaaagcttgcgcctgattatccggtggtccagaagattctggattaccgccag
ctgacaaagctgaattccacctatgcggaaggcctggcagcctatatcggtgaggacgga
aggattcacggcaaattcaaccagactatcacggctacgggacgcatcagcagcacggag
ccgaaccttcagaatatcccggtccgcatggccctgggcagggaaatccgcaaagtgttt
gttcccaaggaaggctgtgtgttcgtggacgcggactattcccagattgagctgcgtatc
ctggcccacatgtcaggggatgagcggctgatcgaggcataccgttccgcccaggacatc
catgccatcaccgcatcccaggtattccatgtaccccttgatgaagtgactcctctacag
cgccgcaacgcaaaggcagtgaacttcggaattgtatacggcatcagcgcctttgggctc
agcgagggactcagcatctcccgcaaggaggcggtggagtacatcgataaatattttgag
acctatccgggggttaagatattcctggacggactggtcaagcagggcaaggagcggggc
tacgtgacgaccctgtacggcaggagacggcccattcctgagcttaagtccgccaacttt
atgcagcgccagttcggagagcgggtggccatgaattcaccgattcagggaaccgcggcg
gacgttatgaagatagccatgattgcagtggacagggagctgaaaaagcgaaacttgaaa
tccagaatcgtccttcagattcacgatgagctcctgattgagacggcacaggatgaaatc
cggacagttaagaacattctgaccgataagatgaagcatgcggcggatttaagggtttca
ctggaagtggaagcggaagtgggaaaatcctggtttgatgccaagtag
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