Lachnoclostridium sp. YL32: A4V08_13390
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Entry
A4V08_13390 CDS
T04430
Name
(GenBank) peptide ABC transporter permease
KO
K02034
peptide/nickel transport system permease protein
Organism
lacy
Lachnoclostridium sp. YL32
Pathway
lacy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lacy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A4V08_13390
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lacy02000
]
A4V08_13390
Transporters [BR:
lacy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
A4V08_13390
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Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Asp5
Motif
Other DBs
NCBI-ProteinID:
ANU46648
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All DBs
Position
complement(2943916..2944884)
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AA seq
322 aa
AA seq
DB search
MKMNRKNPYGDIGRENYWQTVRRRFLHHRLACISLVVLAVICAAAILAPVIAPYDPDAIA
GPFGAPPGAGFLLGTDQIGRDMFSRLLYATRISLLVGVLATAISTAIGVSLGLLGGYFGG
WLDIAIMRFTDMVMSFPYILLVLVAAAIFEPGLWSIILILGFVDWPGIARLVRGNVLSLR
ETNFVKSSIVAGMPARHILFSEILPNTVAPILVYATSVMALSMLDEASLSFLGMGVQPPT
ASLGNILNSAQSLTVLTKQPWLWIPPGFLIVVLVVAINFVGDALRDALDPSAVLNLGGAE
PDVEDQEAEDQDAEDQETADSI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaacagaaagaacccttatggggatatcggaagagaaaattactggcagacc
gtaaggcggcggtttctccaccaccgcctggcctgtatcagtctggtggtgctggcagtt
atctgcgctgcggccattctggcgcccgtcatagcgccctatgacccggacgccatcgca
gggcccttcggcgccccgccaggcgccgggtttctgctgggaacggaccagattggacgg
gacatgttttcccgccttttatatgcaacacgtatatccctgctggtgggcgtgctggcc
acagccatatccacggccataggagtcagcctggggctgctggggggatacttcggaggc
tggctggacatagccatcatgcgttttacggatatggtcatgtcctttccatatattctg
ctggtgctggtggcggcagccatctttgaaccggggctctggagcatcatactgattctc
ggatttgtggactggcccggcatcgcccggctggtcaggggcaatgtgctgagccttcgg
gagactaattttgtaaagagcagcattgtggcggggatgcctgccagacatatcctgttt
tcagagatacttcccaatacagttgcgccgattctggtgtacgccacctcagtgatggcc
ctttccatgctggatgaggcttccttaagcttccttggaatgggagtgcagccgcccact
gccagcctgggcaatattctgaacagcgcccagtccctgaccgtgctcacaaaacagccg
tggctctggattccgcccggattcctgatagtggtcctggtggttgccattaattttgtg
ggcgatgccctgagggatgccctggacccgtcggcggttctgaatctgggcggggcagag
ccggacgtcgaggatcaggaggccgaggatcaggacgccgaggatcaggaaacggcggat
agcatataa
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