Lingula anatina: 106160874
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Entry
106160874 CDS
T04921
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen34
KO
K15323
tRNA-splicing endonuclease subunit Sen34 [EC:
4.6.1.16
]
Organism
lak
Lingula anatina
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lak03016
]
106160874
Enzymes [BR:
lak01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
106160874
Transfer RNA biogenesis [BR:
lak03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
106160874
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_int_endo
MscS_TM
Motif
Other DBs
NCBI-GeneID:
106160874
NCBI-ProteinID:
XP_013393098
UniProt:
A0A1S3I4E5
LinkDB
All DBs
Position
Unknown
AA seq
290 aa
AA seq
DB search
MAAEPVKISLVSNKPFIWNAEDACIVLEKYRIVGALAGCLSRAPRQNIQLGLPLQLMPEE
AMLLLQEGYAQLVNSDQNAKLPSPEQVDRFQKMREESFKQQAEIGIAERKLIVQRRLDQI
KEGRKAKRKQRLEKKKANGQDVDERELMRDEDKLDVKDIQITPMGQEHALVQIFTETPWV
EEVDTDVRWDFPSTEEERVRYRVFRDLWRKGHSLTCGGKFGGDFLVYPGDPSRFHSFYIA
VCLLHHQTMSAEKVVAMARLGSTVKKTVVLCSVDDDDELTYTSLQWTGIS
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggcagctgagcctgttaagatttctttagtttctaacaagccctttatttggaatgca
gaagatgcatgtatagtccttgaaaagtaccgtatagtgggtgctctagcaggctgtctg
tccagggcccccagacaaaacatacagctaggtctgccgctacagctgatgccagaggag
gccatgctgctgctgcaggaaggttatgctcagcttgtaaacagtgaccagaacgccaag
ctgccgtcaccagaacaagtggacaggttccagaagatgagggaggagagttttaaacag
caggcagaaataggaatagcagaaagaaaactgatcgtccagagaagacttgaccagata
aaagagggcagaaaagcaaaacggaagcagagactagagaagaagaaagccaatggccag
gacgtagacgaaagagaactgatgagggatgaagacaaactggatgttaaagacatacag
atcacccctatggggcaggaacatgcattggtgcagatattcacagaaaccccctgggtt
gaagaagttgacacagacgtcagatgggatttcccgtcaacagaggaggagagggtgaga
tacagggtgttccgtgacctctggaggaaaggtcacagcctgacctgtggcgggaaattt
ggtggagatttcctggtgtatccaggagaccccagtagattccactcgttctacatagct
gtttgtctgctccatcatcagacaatgtccgccgagaaagtcgtggcaatggcacgtctg
ggctccacggtgaagaagacagtcgtcttgtgttctgtagacgatgacgatgaactgact
tacacttctttacagtggacaggaattagttga
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