Lacimicrobium alkaliphilum: AT746_00105
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Entry
AT746_00105 CDS
T04189
Name
(GenBank) hypothetical protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
lal
Lacimicrobium alkaliphilum
Pathway
lal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT746_00105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lal03000
]
AT746_00105
03400 DNA repair and recombination proteins [BR:
lal03400
]
AT746_00105
Enzymes [BR:
lal01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
AT746_00105
Transcription factors [BR:
lal03000
]
Prokaryotic type
Helix-turn-helix
AraC family
AT746_00105
DNA repair and recombination proteins [BR:
lal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT746_00105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HTH_24
Ran-binding
HTH_11
Motif
Other DBs
NCBI-ProteinID:
ALS96834
UniProt:
A0A0U3AFM6
LinkDB
All DBs
Position
complement(19933..21270)
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AA seq
445 aa
AA seq
DB search
MQAFQQARMARDKRFDGVFFVAVKSTGIFCRPVCPAVLPKEQNVTYYNFAAQAMAAGYRP
CLRCRPDSAPGSYAWKGVDTTVERALSLLSAFPHLSLQQIAEKLGITDRYLRGLFQQHLG
LAPKRYQLYQQLLFAKQLLHQTGLSIEQVAQAAGFQSARRLQDNVRQHLQLTPSQIRGKQ
QHTRALELTLSFRPPYNWPQVRDFLALRAVPQMEWVDDDSYARTFRMDGRQGWFHARVDE
ANDCFVVKLEMQPLDNLKAVIDQIRRILDLDAQMPLISTALTNCGIAVQDQLPGLRLPGV
WAPFEAGCRAILGQQVSVKAAIGLLTRLTELCGESSERGRLFPLPEAIAEADLTSLRMPS
SRRETLKRFASYYLQHANPDPDDLLGIKGIGPWTVSYIKLRGYSQPDIWLDSDLVIKKQI
ANYALQPDQAAPWRSYLTLQLWSML
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcatttcaacaggcgagaatggcaagggacaaacgttttgacggtgtgttcttt
gtggcggtaaaaagcaccggcatattctgtcgcccggtgtgcccggcagtgttaccaaaa
gagcaaaatgttacctattacaacttcgctgcccaggccatggcggcaggctaccgcccc
tgtctgcgctgcaggcccgattcggcacctgggtcctatgcctggaaaggggtggacact
acggtagagcgtgcactgtcactgttaagtgcgttcccgcatctgagtctgcaacagatt
gcagaaaagctcggtatcactgaccgctatctgcgcggcctgtttcagcagcatcttggt
cttgcgccaaaacgctaccagttgtaccagcaactgttatttgccaagcaattattacat
cagaccggcctcagcattgaacaggtagcccaggccgcaggctttcaatcggcccgccga
ttgcaggacaatgttcgtcagcacctgcaactgacgcccagccagatacgtggcaaacag
caacatacccgggcgctggagctgacattatcgttcaggccgccgtataactggcctcag
gtgcgggactttctcgccttaagagcggtaccgcagatggagtgggtggatgacgacagt
tatgccagaaccttcaggatggatgggcgacaaggctggttccatgcccgtgtggatgag
gctaacgactgttttgtggtgaaactggagatgcagccactggataatctcaaggctgtg
attgatcagatcaggcggatactggatctggatgcacagatgcctctgataagcacggct
ctgaccaactgtggcattgcagtacaggatcagttgccgggtctgcgtctgcctggagta
tgggcccccttcgaagccggttgccgggccatactcggccagcaggtcagcgttaaggcc
gccattggtctgctgacacgactgacagaactttgtggtgaatcatctgaacgggggcgg
ttatttccgctgccggaagcgatagcggaggccgatttaaccagcctgcgaatgccttcc
tcgcgccgggaaaccctgaagcgttttgccagctattatctgcagcacgcaaaccctgac
ccggacgatctgctcgggatcaaaggcattggtccctggacagtcagttacattaaactg
cgcggttattcacaaccggatatctggctggactccgatctggtgatcaaaaagcaaatc
gccaactatgcgctacaaccggaccaggcagcaccctggcgcagctatctgaccctgcaa
ctctggagcatgttatga
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