Companilactobacillus allii: BTM29_10375
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Entry
BTM29_10375 CDS
T05413
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lalw
Companilactobacillus allii
Pathway
lalw03030
DNA replication
lalw03430
Mismatch repair
lalw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lalw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BTM29_10375
03430 Mismatch repair
BTM29_10375
03440 Homologous recombination
BTM29_10375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lalw03032
]
BTM29_10375
03400 DNA repair and recombination proteins [BR:
lalw03400
]
BTM29_10375
Enzymes [BR:
lalw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BTM29_10375
DNA replication proteins [BR:
lalw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BTM29_10375
DNA repair and recombination proteins [BR:
lalw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BTM29_10375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
DUF2853
Motif
Other DBs
NCBI-ProteinID:
APX72933
UniProt:
A0A1P8Q4Z8
LinkDB
All DBs
Position
complement(2088905..2092231)
Genome browser
AA seq
1108 aa
AA seq
DB search
MQTQLQVMSSFSLLHSPVKLPELVDEASKRGYSSIALTDIDNLYGSIDFYKYAKKSGVKP
IIGMVANLLGIQDEVNTYSLILLAKNDAGYHNLIKISSQIMSSHDSINIDSIKQFMSDIF
VITPADQSEILVSDNTGDYFRKLKDVTDPNSIFLGVGLYSEQIDNVKQIKEISNSTDIPM
SALGDVRYINEDDHLSYQVLNNLRTGEKFENINQVIENGDHYLRKADVFETDFANFDMQS
AVATSNQIADQCNVEIEFKETQLPKFESPNNLTSESFLRDLATRGLNKRLDGKVTSDYVK
RLNYELSVIEEMGFSDYFLIVWDVIKHAHEVGIRTGPGRGSAAGSLVSYTLGITQVDPIK
YDLLFERFLNPQRVNMPDIDLDLPDDRRDEMVMYMHDKYGSTHMAQIITFGTLAAKMALR
DISRTFSQTSFQLTQWSNAIPRKLNITLEESINESNTLKDLVESSQENQLIFKVARRVEG
IPRHYSTHAAGIVLSKKPMTDIVAVQLEDDGINLTQQTKNNVESVGLLKMDFLGLRNLTI
LDKAIKLISKKYKKEFVPERIPLNDQKTLELFQRGDTDGVFQFESDGIKSVLRQLKPTSF
NDVVATNALYRPGPMQNISTFIARKHGSEPVTYPDSSLEKILEPTYGILVYQEQVMQASS
KMAGFSLADADILRRAISKKNELLMDENRKKFVEGAVKLGHDRDAAEKVYKYIETFGNYG
FNKSHSVAYSMVAFWLAYIKVHFPQIFFICLMNANLNSEKKITTYIQAAKDKFIPIKNVN
INQSNATFKMDDDGIRFGFLSVKGMRRDLAENIIQERQKNGEYTSVLNFLQRIDIRFVKD
DYLDPLILSGVFDSFNRNRRELMLDFKDLIESMQLAGDNLSLFDVLDPKKNVVDDYSLTE
KLNQEKKFLGVYVSGHPVEKYRERLLNINTVKISNLKDFKKSNVSILGLIKRPRVIRTKK
GQKMCFATVEDETGSISVTIFPKLFQKLENVELEGKIFLIVGRADDGMRGDLEFIADKFN
DPKQYTVKLPKNKLYLRVSFAFDNEDNLSKLYKLIESSPGKIPVILYRERTKQAVILKSN
RWINFSDEIGQKLEDLLGKKNVFLKNSD
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacacaattacaagtgatgagcagttttagtttgctgcacagtcccgtaaagcta
cctgaactagttgatgaggctagtaaacgaggttactcatcgattgctctaactgatata
gacaatttatatggttcaattgatttttataagtatgctaaaaaatctggagtgaagcca
attattggaatggttgcaaacctacttggtattcaagatgaagtaaatacttattcactt
atcttattggcaaaaaacgatgctggataccataatcttataaaaatatcttcacaaata
atgtcttctcatgattctataaatattgattctatcaagcaatttatgtcagatatattt
gttatcactccagctgatcagtctgaaatcttggtttcagataatactggagactatttt
agaaaattaaaagatgtaacagatcctaattctatttttttaggagtgggattatattct
gaacaaattgataatgtaaaacagatcaaagaaatctcaaatagtactgatatcccaatg
tcagcacttggcgacgttaggtatataaacgaagatgatcacttatcgtatcaggtatta
aataatttgagaactggggaaaaatttgaaaatattaaccaggtaattgaaaatggtgat
cattatttacggaaagctgatgtatttgaaactgattttgcaaattttgatatgcaaagt
gcagtagcgacttctaatcagattgctgatcaatgtaatgttgaaattgaatttaaggaa
acgcaattacctaagtttgaatcaccgaataatttaacgtcagaaagttttttgagagat
ttagccactcgaggattaaataaaagactggatggtaaagtcacaagtgattacgttaaa
cgtctgaattatgaattgagtgttatagaagagatggggttctcggattactttttgata
gtctgggatgttataaagcatgcacacgaagtcggtattagaactggtcctggacgtggg
tcagcagctggttcattggtttcgtatacgttaggaataacgcaagtggaccctataaag
tatgatttgctgtttgagcggtttttaaaccctcaacgggtaaatatgccagatatcgat
ttagacctcccagatgaccgcagagacgaaatggtaatgtatatgcatgataaatatgga
tcaactcatatggcacagattattacctttggcacattagctgcaaaaatggctttgcgt
gatatttctaggacttttagtcaaacatcgtttcaattgactcaatggtcaaatgcaatt
ccacgtaagttaaatattacgcttgaagaatcaattaacgaatctaacactttaaaggat
ctagttgaaagctcccaggagaatcaattgatcttcaaggttgctagaagagttgagggt
attcctagacattattctactcacgctgcaggaattgttttgagtaaaaagccaatgact
gatatcgttgccgttcagttggaagatgacgggattaatctgactcagcaaacaaagaat
aatgttgaaagcgttggattacttaaaatggatttcttaggtttaagaaatctaaccata
ttggataaagcgattaaacttatttctaagaaatataaaaaagagttcgttccagaaaga
attcctttgaatgaccaaaaaactcttgaattgtttcaaagaggggatactgatggtgtt
ttccaatttgaatctgacggaattaaaagtgtcttgaggcaattgaaaccgactagtttt
aatgatgttgtagcaactaatgcgctgtatcgtcctggtccaatgcaaaatatttcaaca
tttattgcacgtaaacatggctcagaacctgttacatatccggattcttcactagaaaag
atacttgagccaacgtatgggatcttggtataccaagaacaagttatgcaggcgtcatca
aagatggctggtttttcattagcagatgccgatattttgcggcgtgccattagtaaaaaa
aatgaattattgatggatgaaaatcgcaaaaagtttgtagaaggtgctgtaaagctaggc
catgatcgtgatgcggctgagaaggtttacaaatatatagaaacatttggtaattatgga
ttcaataaatctcactctgtagcttattccatggtggctttttggctggcatatattaaa
gttcatttcccacagatattttttatctgtctgatgaatgctaatttaaatagtgaaaag
aaaatcacaacatatattcaagctgctaaagataaatttattccaattaaaaacgtgaat
attaatcaaagtaatgcaacttttaaaatggatgatgacggtatccgctttggattttta
agtgtcaaagggatgcgaagagatttagcagaaaatataattcaagaacgtcaaaaaaat
ggtgagtatactagtgtgttgaatttcttacaaagaatagatattcgatttgttaaagat
gactatttggatccattgattttgtcaggagtatttgattcgtttaatcgtaatcgacgg
gaattgatgcttgatttcaaagacttaatagagagtatgcaacttgcgggggataattta
tcactatttgatgtcttagatccgaagaaaaatgttgtggatgactactctttaactgaa
aaattaaatcaagaaaaaaaatttctaggagtttatgtatcgggacatccggttgagaag
tatcgtgagcggttattaaatataaatacagttaaaatttctaatttgaaggatttcaaa
aagagcaatgtgtctattttaggattaataaagcgtccacgtgttattcgaactaaaaag
gggcagaaaatgtgttttgcgactgtagaagatgaaactggttccatctcagtaacaatt
tttccaaaattatttcagaaattagaaaatgttgaattagaaggcaaaatttttctaatt
gttggtcgtgcagatgatggaatgaggggggatttggaatttattgccgataaattcaac
gatcccaaacaatacacagttaagttacctaaaaataaattatatttaagagtaagcttt
gcgtttgataatgaagacaatttgtcaaaactatataaattgatagaaagttcacctggg
aaaattccagtgatactttatcgagagagaactaagcaggcagtaatcttaaagtcgaat
cgttggataaacttttctgatgaaattgggcaaaagttagaagatttattaggcaaaaaa
aatgttttccttaaaaatagtgactaa
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