Lysobacter arenosi: HIV01_012160
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Entry
HIV01_012160 CDS
T07237
Name
(GenBank) protocatechuate 3,4-dioxygenase subunit beta
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
lare
Lysobacter arenosi
Pathway
lare00362
Benzoate degradation
lare01100
Metabolic pathways
lare01120
Microbial metabolism in diverse environments
lare01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
lare00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
HIV01_012160
00624 Polycyclic aromatic hydrocarbon degradation
HIV01_012160
Enzymes [BR:
lare01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
HIV01_012160
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Gene cluster
GFIT
Motif
Pfam:
Dioxygenase_C
CarboxypepD_reg
DUF4198
SdrD_B
Big_1
SpaA
CooC_C
YtkA
Motif
Other DBs
NCBI-ProteinID:
QSX73972
LinkDB
All DBs
Position
complement(2618479..2619150)
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AA seq
223 aa
AA seq
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MRKVPKVPDSRRYLLGALAGFTLASRWGGALARTLLPATPAQTSGPFYPKLRPLDQDMDL
TVVAGRPGRAKGQVIHVTGRVLDSNGKPVPGARIELWQANAGGRYDHPDDINPEPLDPNF
QGFATQLTDAEGRYRFKTIKPGAYPMNPANPVNVRPPHIHLDVVAADQHLVTQMYFPGEK
LNSQDRIFNAIKGSKDTVIARVIAPTPDIEPGASLLHFDIVLA
NT seq
672 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaaggtgcccaaggtgcctgactcgcgtcgatacctgctcggcgcgctcgcgggt
ttcaccctggcgtcgcgctggggcggcgccctggcaaggaccctgctgccggccacgcct
gcgcagaccagcggcccgttctacccgaagctgcggccgctcgaccaggacatggatctg
accgttgtcgccgggcgtcccgggcgcgccaaggggcaggtgatccatgtgaccgggcgc
gtactggacagcaatggcaagccggtaccgggagcccgcatcgaactgtggcaggccaat
gccggtggtcgttacgaccatcccgacgacatcaatcccgaaccgctggatcccaacttc
cagggcttcgccacgcaactgaccgacgcggaaggacgctaccggttcaagacgatcaag
cccggcgcctatccgatgaatccggccaacccggtcaatgtccgtccaccgcacatccat
ctggacgtggttgcggccgaccagcacctggtcacgcagatgtacttccccggcgagaag
ctcaacagccaggaccgcatcttcaacgcgatcaagggaagcaaggacacggtcatcgcc
agggtgatcgcgccgacgccggacatcgagccgggtgcgagcctgcttcacttcgacatc
gtgctggcctga
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