KEGG   Candidatus Liberibacter asiaticus Ishi-1: CGUJ_02490
Entry
CGUJ_02490        CDS       T03607                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase factor sigma-32
  KO
K03089  RNA polymerase sigma-32 factor
Organism
lat  Candidatus Liberibacter asiaticus Ishi-1
Brite
KEGG Orthology (KO) [BR:lat00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lat03021]
    CGUJ_02490 (rpoH)
Transcription machinery [BR:lat03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CGUJ_02490 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 HTH_11 Sigma70_r4_2 DUF4300
Other DBs
NCBI-ProteinID: BAP26472
LinkDB
Position
complement(656519..657427)
AA seq 302 aa
MNRKNMSIIVNGEIGLSRYIHEIRKIPMLEKQEEYVLAKRYREHGDLSAAHRLVTSHLRL
VVKIAMGYRGYGLPISEVVSEGNIGLMQAVKKFDPERGFRLATYSMWWIKAAMQEYILRS
WSLVKIGTTANQKRLFFNLRRLKGHLQAITDNNLKPEQVVAIAKKLNVSESEVISMNCRL
AGDESLNALINSSDKNSSQWQDWLVYDHDGQEQVLIEKEERKNRRNMLTRSMSVLNPRER
RIFEARRLQENPVTLENLSSEFEVSRERVRQIEARAFKKVQESIQKQVELSSSPPLLQKP
RY
NT seq 909 nt   +upstreamnt  +downstreamnt
atgaaccgtaaaaacatgtctataatagtaaatggcgaaattggactcagtcgttatatt
cacgagatacgaaaaattcctatgttggaaaaacaagaagaatatgtgcttgctaaaaga
tatcgtgagcatggtgatttaagcgctgcacacagattagtgacaagccatctcaggctt
gtcgtcaaaattgcgatgggttatcgcggttatggcttgcctatcagcgaagtcgtatcc
gaaggcaatatagggctgatgcaggcagttaaaaaatttgatccagaacgtggttttcgt
cttgctacatacagcatgtggtggattaaagccgcaatgcaagaatatattttgcgttca
tggtcactagtgaaaataggaaccacagctaatcaaaaacgtcttttcttcaatttacga
cgtctaaaaggacatctacaagctataactgataacaatttaaaaccggaacaagtcgtt
gccatcgctaaaaaacttaatgtttcggaatcagaagtaatttcgatgaattgtcgccta
gctggagacgagtctctcaatgctctcatcaattcttcagacaaaaattctagccaatgg
caagattggttagtatatgatcacgatggccaagaacaagtacttattgaaaaagaagaa
cgaaaaaatcgtcgtaacatgcttacccgttctatgtctgtattaaatccccgagaaaga
aggatttttgaagcacgacgtctgcaagaaaatcctgtaacacttgagaatttatcatct
gagtttgaagtaagtcgcgaacgcgtacgacaaatagaagcacgtgcttttaagaaagta
caagaatcaatacaaaagcaggtagagctatcgtcttctccccccctactacaaaaaccg
agatattga

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