Loxodonta africana (African savanna elephant): 100654359
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Entry
100654359 CDS
T04351
Symbol
VLDLR
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav05017
Spinocerebellar ataxia
lav05417
Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
100654359 (VLDLR)
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
100654359 (VLDLR)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lav04131
]
100654359 (VLDLR)
Membrane trafficking [BR:
lav04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
100654359 (VLDLR)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ldl_recept_a
Ldl_recept_b
FXa_inhibition
cEGF
EGF_CA
SGL
EGF
hEGF
DUF4010
Motif
Other DBs
NCBI-GeneID:
100654359
NCBI-ProteinID:
XP_003420527
LinkDB
All DBs
Position
Unknown
AA seq
873 aa
AA seq
DB search
MGTSARWALWLLLALSWAPRGSGATGAGRKAKCEPSQFQCTNGRCITLLWKCDGDEDCAD
GSDEKNCVKKTCTESDFVCNNGQCVPNRWQCDGDPDCEDGSDESPEQCHMRTCRINEISC
GARSTQCVPVSWRCDGESDCDSGEDEENCGNVTCSADEFTCSSGRCVSRNFVCNGQDDCS
DGSDELDCAPPTCGPHEFQCSTSSCIPLSWVCDNDADCSDKSDESLEQCGRQPVTHTRCP
ASEIQCSSGECIHKKWRCDGDPDCKDGSDEVHCPSRTCQPDQFECEDGSCVHGTRQCNGI
RDCVDGSDEVNCKNVNQCLGPGKFKCRSGECIDISQVCDREQDCRDWSDEPLKECNVNEC
LVNNGGCSHICKDLVIGYECDCAAGFELIDRKTCGDIDECQNPGICSQICINLKGGYKCE
CSRGYQMDLATGVCKAVGKEPSLIFTNRRDIRKIGLERKEYIQLVEQLRNTVALDADIAA
QKLFWADLSQKAIFSASIDDKVGRHVKMIDNVYNPAAIAVDWVYKTIYWTDAASKTISVA
TLDGTKRKLLFNSDLREPASIAVDPLSGFVYWSDWGEPAKIEKAGMNGFDRRPLVTVDIQ
WPNGITLDLIKSRLYWLDSKLHMLSSVDLNGQDRRIVLKSLEFLAHPLALTIFEDRVYWI
DGENEAVYGANKFTGSELATLVNNLNDAQDIIVYHELVQPSGKNWCEEDMENGGCEYLCL
PAPQINDHSPKYTCSCPNGYNLEENGHKCRSTATTVTYSEIKDAHRTEGSPTSGLVPGGI
NVTTAVSEVSVPPRGTSAAWATLPLLLLAMAAVGGYLMWRNWQHKNTKSMNFDNPVYLKT
TEEDLSIDIGRHSASVGHTYPAISVVSTDDDLA
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgtccgcgcgctgggcgctctggctgctgctcgcgctgagctgggcgccccgg
gggagcggcgccaccggagcggggagaaaagccaaatgcgaaccctcccagttccagtgt
accaacggtcgctgcatcactctgttgtggaaatgtgatggggacgaggactgtgctgac
ggcagtgacgagaagaactgtgtaaagaagacgtgtactgagtctgacttcgtgtgcaac
aatggccagtgtgttcccaacagatggcagtgcgatggggaccccgactgtgaagacggt
tcagatgaaagcccagaacaatgccatatgagaacatgtcgcataaatgaaatcagctgt
ggtgcccgttccactcagtgtgtcccagtgtcctggaggtgtgatggtgaaagtgattgt
gacagtggagaagatgaagaaaactgtggcaacgtgacatgcagcgccgacgagttcacc
tgttccagcggccgctgcgtctccaggaactttgtgtgcaacggtcaggacgactgcagt
gacggcagcgacgagctggactgcgcgccgccaacctgcggcccccacgagttccagtgc
agcacctcgtcctgcatccccctcagctgggtatgcgacaacgacgccgactgctcagac
aagtcggacgagtcccttgagcagtgtggccgccagccggtcacccacacccgctgccca
gccagcgagatccagtgcagctctggcgagtgcatccataagaagtggcgctgtgacggt
gaccccgactgcaaggacggcagcgatgaggtccactgtccttctcgaacctgccagccg
gaccagttcgagtgtgaggatggcagctgtgtccacggcaccaggcagtgtaatggcatc
cgagactgcgtggacggttccgacgaagtcaactgcaaaaatgtcaaccagtgtttgggt
cctgggaagttcaagtgccggagtggagagtgcatcgatatcagccaagtgtgtgaccga
gagcaggactgcagggactggagcgacgaacccctgaaagagtgtaatgtgaacgaatgc
ttggttaataacggcgggtgctcccatatctgcaaagacctagtgataggctatgagtgt
gactgcgcagctgggtttgaactgatagataggaaaacctgtggagatattgacgaatgc
caaaatccaggaatctgcagtcaaatttgtatcaacttaaaaggcggttacaagtgtgaa
tgtagtcgtggctatcaaatggatcttgccactggcgtgtgcaaggcagtaggcaaagag
cccagtctgatcttcactaatcgaagagacatcaggaagattggcttagagaggaaagaa
tatatccaactagttgaacagctaaggaacacggtggctcttgatgctgacatagctgct
cagaaactgttctgggctgatctgagccaaaaggccatcttcagtgcctcaattgatgac
aaggttggtagacatgttaaaatgatcgacaatgtctataatcctgcagccattgctgtt
gattgggtgtacaagaccatctactggactgacgcggcttctaagactatttcagtagct
accctagacggaaccaagaggaagttgctgtttaactcggacttgcgagagcctgcctcc
atagctgtggaccccttgtctggctttgtttattggtcagactggggcgaaccagctaag
atagaaaaagcaggaatgaatggatttgaccggcggccgctggtgacagtggacatccaa
tggcccaacggcattactctggaccttataaaaagccgcctctattggcttgattccaag
ttgcacatgttatccagtgtggacttgaatggccaggatcgtcggatagtactcaagtct
ctggaattcctcgctcaccctctggcactaacaatatttgaggatcgtgtctactggata
gatggggaaaacgaagcagtttatggtgccaataaattcaccggatcggagctggccact
ctggttaacaaccttaacgatgcccaagacatcattgtctatcatgaacttgtacagcca
tcaggtaaaaactggtgtgaagaagacatggagaatggaggatgcgagtatctatgcctg
ccagcaccccagattaacgaccactctccaaagtacacctgttcctgtcccaatgggtat
aatctagaggagaatggccacaaatgccgaagtactgcaactactgtgacgtacagtgag
ataaaagatgcccacagaacagaaggttcaccaactagtggactagttcctggagggatc
aatgtgaccacagcagtgtcggaggtcagtgtccccccaaggggaacttccgctgcctgg
gccacccttcctctcttgctcttagcgatggcggcggtaggcggctacctgatgtggagg
aattggcaacacaagaacacgaagagtatgaactttgacaatcctgtgtacttgaagacc
accgaagaggatctctcaatagacattggtagacacagtgcctctgtcggacacacgtac
ccagcaatttcagttgtaagcacagatgatgacctagcttga
DBGET
integrated database retrieval system
