KEGG   Loxodonta africana (African savanna elephant): 100658489
Entry
100658489         CDS       T04351                                 

Gene name
TUBAL3
Definition
(RefSeq) LOW QUALITY PROTEIN: tubulin alpha chain-like 3
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100658489 (TUBAL3)
  09143 Cell growth and death
   04210 Apoptosis
    100658489 (TUBAL3)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100658489 (TUBAL3)
   04540 Gap junction
    100658489 (TUBAL3)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100658489 (TUBAL3)
   05012 Parkinson disease
    100658489 (TUBAL3)
   05014 Amyotrophic lateral sclerosis
    100658489 (TUBAL3)
   05016 Huntington disease
    100658489 (TUBAL3)
   05020 Prion disease
    100658489 (TUBAL3)
   05022 Pathways of neurodegeneration - multiple diseases
    100658489 (TUBAL3)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100658489 (TUBAL3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100658489 (TUBAL3)
   03036 Chromosome and associated proteins [BR:lav03036]
    100658489 (TUBAL3)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100658489 (TUBAL3)
   04147 Exosome [BR:lav04147]
    100658489 (TUBAL3)
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100658489 (TUBAL3)
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100658489 (TUBAL3)
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100658489 (TUBAL3)
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100658489 (TUBAL3)
  Exosomal proteins of other body fluids (saliva and urine)
   100658489 (TUBAL3)
  Exosomal proteins of colorectal cancer cells
   100658489 (TUBAL3)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100658489
NCBI-ProteinID: XP_023404513
LinkDB
Position
Unknown
AA seq 464 aa
MLALRQMGSPKSYHLDGLKRESLSIHIGQAGVQIGDALWELYCLEHGIQSDGVILDNKID
QLENAKMEPTKAPFNNFFCETRAGKYVPRVLFMDLEPTVIDEIRIGKYHSLFHPEXLISG
KEDAAINYAXGHRSVGPEIIDLVLERIRKLAEQCSGLQGFLIFRSFGGGTGSGFTSLLMQ
QLLIEYSRKTXLEFSIYPAPRTSTAVVEPYNSVLTTHSTTEHSDCAFMVDNEAIYDICHR
KLGVRCPSYANINRLMGQVVSSITASFRFKGSLNVDLIEFQTNLVPYPRIHFPMTTYAPI
ISADKPYHEQFSVQDITAACFEFSSQLVKCDPHLGKYMACCLLYRGDVVSKDINSAIAAM
KSRNSVQFVDWCPTGFKVGINNQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWAXLDHKF
DLMYTKRVFLHWYIKEGMEEGEFSMAREDLAVLEKDYEEVGQSF
NT seq 1395 nt   +upstreamnt  +downstreamnt
atgctggccctcagacagatgggcagccccaaatcataccatttagatggtctgaaaagg
gagagcctttccattcacattggtcaagctggtgtccagattggggatgctctttgggaa
ctctattgtctggaacatggaatccagtcagatggtgtcatccttgacaataaaattgat
caattagaaaatgctaaaatggagcctacgaaggcacctttcaataacttcttctgtgag
acaagagctgggaagtatgtgcccagagttctcttcatggacctggaaccaactgttata
gatgagattcgtatagggaagtaccactcactcttccacccagaataactcattagtgga
aaggaagatgctgcaatcaactacgcctgaggccatcgctctgtggggccagagatcatt
gaccttgtgctagagaggatccgaaagctggcagaacagtgcagtggacttcaaggattt
ttgattttccgaagctttggaggaggcactggatcaggatttacatctctcttaatgcag
caactcttgatagaatatagcaggaagactnagttggagttctccatctacccagccccc
aggacctccactgctgtagtggagccttacaactccgtcctcactacccattccaccaca
gagcactcagactgtgccttcatggtggacaatgaggccatctatgacatatgccatcgt
aagcttggtgtcagatgcccttcttatgccaatattaataggctgatgggtcaggtggtg
tcttccattactgcttccttcaggtttaaagggtccttgaacgtggacctaattgaattc
cagaccaaccttgtaccttatccgagaatacatttccccatgacaacctatgctcccatc
atctctgctgacaaaccttaccacgagcagttctctgtgcaagacatcactgctgcttgc
tttgagttctccagccagctggtcaagtgtgaccctcatcttgggaagtacatggcttgc
tgcctactatacagaggtgatgtggtctctaaggatataaattccgcaattgcagccatg
aagtcaaggaattctgtccagtttgtggattggtgtccaactggtttcaaggtgggcatc
aacaatcagccaccaactgtggtgccaggaggggacctggccaaagtacagagggctgtc
tgcatgctgagcaacaccacggcgattgcagaggcctgggcangcctggaccacaaattt
gacctcatgtataccaagcgggtgtttctgcattggtacattaaagaaggcatggaagaa
ggagagttctcaatggccagggaagatttggcagtcctggagaaggattatgaggaagtg
gggcaaagtttttga

KEGG   Loxodonta africana (African savanna elephant): 100660618
Entry
100660618         CDS       T04351                                 

Definition
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100660618
  09143 Cell growth and death
   04210 Apoptosis
    100660618
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100660618
   04540 Gap junction
    100660618
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100660618
   05012 Parkinson disease
    100660618
   05014 Amyotrophic lateral sclerosis
    100660618
   05016 Huntington disease
    100660618
   05020 Prion disease
    100660618
   05022 Pathways of neurodegeneration - multiple diseases
    100660618
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100660618
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100660618
   03036 Chromosome and associated proteins [BR:lav03036]
    100660618
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100660618
   04147 Exosome [BR:lav04147]
    100660618
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100660618
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100660618
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100660618
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100660618
  Exosomal proteins of other body fluids (saliva and urine)
   100660618
  Exosomal proteins of colorectal cancer cells
   100660618
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100660618
NCBI-ProteinID: XP_010597188
LinkDB
Position
Unknown
AA seq 415 aa
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLME
RLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1248 nt   +upstreamnt  +downstreamnt
atgccaagtgacaaaaccatcggcggtggggacgactcgttcaacacgttcttcagtgag
accggggctggcaagcacgtgcccagggcagtgtttgtggacctggagcccaccgtggtt
gatgaagtgcgcacggggacctaccggcagctcttccacccggagcagctcatcaccggc
aaggaagatgcagccaataactatgccagaggccattacaccatcggcaaagagatcgtc
gacctggtgctggaccggatccgcaaactggcggatctgtgcacaggcctgcagggcttc
ctcatcttccacagcttcgggggaggcaccggctcgggctttgcgtctctgctcatggag
cggctctcggtggactatggcaagaagtccaagctggagtttgccatttacccggcgccc
caggtctccacggccgtggtcgagccctacaactccatcctgaccacccacacgaccctg
gagcattccgactgtgccttcatggtggacaatgaagccatctatgacatctgtcggcgc
aacctcgacatcgagcggcccacgtacaccaacctcaaccgtctgattgggcagatcgtg
tcctctatcacggcctccctacgattcgacggggccctgaatgtggacctgacggaattc
cagaccaacctggtcccgtacccccgcatccacttccccctggccacctacgccccggtc
atctcggctgagaaggcctaccacgagcagctctctgtggctgagatcaccaatgcctgc
tttgagccggccaaccagatggtcaagtgtgaccctcgccacggcaagtacatggcctgc
tgcatgctgtaccggggggacgtggtccccaaagatgtcaatgcggccattgccaccatc
aagaccaagcgcaccatccagtttgtggactggtgcccaactggatttaaggtgggcatc
aactaccagccccccaccgtcgtccccgggggagacctggccaaggtgcagcgcgccgtg
tgcatgctgagcaacaccacggccatcgccgaggcctgggctcgcctcgaccacaagttc
gacctcatgtatgccaagcgcgcctttgtgcactggtacgtgggggaaggcatggaggaa
ggcgagttctcggaggcccgggaggacctggcggcgctggagaaggattatgaagaggtg
ggcgtggactccgtggaagcagaggccgaggaaggggaagaatactag

KEGG   Loxodonta africana (African savanna elephant): 100661910
Entry
100661910         CDS       T04351                                 

Gene name
TUBA8
Definition
(RefSeq) tubulin alpha-8 chain
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100661910 (TUBA8)
  09143 Cell growth and death
   04210 Apoptosis
    100661910 (TUBA8)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100661910 (TUBA8)
   04540 Gap junction
    100661910 (TUBA8)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100661910 (TUBA8)
   05012 Parkinson disease
    100661910 (TUBA8)
   05014 Amyotrophic lateral sclerosis
    100661910 (TUBA8)
   05016 Huntington disease
    100661910 (TUBA8)
   05020 Prion disease
    100661910 (TUBA8)
   05022 Pathways of neurodegeneration - multiple diseases
    100661910 (TUBA8)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100661910 (TUBA8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100661910 (TUBA8)
   03036 Chromosome and associated proteins [BR:lav03036]
    100661910 (TUBA8)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100661910 (TUBA8)
   04147 Exosome [BR:lav04147]
    100661910 (TUBA8)
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100661910 (TUBA8)
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100661910 (TUBA8)
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100661910 (TUBA8)
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100661910 (TUBA8)
  Exosomal proteins of other body fluids (saliva and urine)
   100661910 (TUBA8)
  Exosomal proteins of colorectal cancer cells
   100661910 (TUBA8)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100661910
NCBI-ProteinID: XP_010589075
LinkDB
Position
Unknown
AA seq 449 aa
MRECISVHVGQAGVQIGNACWELFCLEHGIQADGTFGAQASKVNDDDSFTTFFSETGNGK
HVPRAVMVDLEPTVVDEVRAGTYRQLFHPEQLITGKEDAANNYARGHYTVGKESIDLVLD
RIRKLTDACSGLQGFLIFHSFGGGTGSGFTSLLMERLSLDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPIISAEKAYHEQLSVAEITSSCFEPNS
QMVKCDPRHGKYMACCMLYRGDVVPKDVNVAIAAIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGTDSFEEENEGEEF
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgggaatgcatatcagtccacgtgggtcaagcaggagttcagatcggcaatgcctgc
tgggagctcttctgcctggaacacggcatccaggctgacggcacctttggtgcccaggcc
agcaaggtcaacgatgacgactccttcaccacctttttcagtgagactggcaatgggaag
catgtgccccgagctgtcatggtagacctggagcctactgtcgtggatgaggttcgggca
ggaacctaccgccagctcttccatccagagcaactgatcacaggaaaggaagatgcagct
aacaactatgcccggggccactatacagtgggcaaggagagcattgacctggtgctggac
cgcatacggaagctgacagatgcctgctctgggttgcaaggcttcctgatcttccacagt
tttggtgggggcactggctccggctttacttctctgctgatggaacgcctctccctagat
tacggcaagaagtccaagctagagtttgctatctacccggccccacaggtgtccactgca
gtggtagagccctacaactccatcctgaccacccataccacactggaacattcagattgt
gctttcatggtggacaatgaagccatctatgacatctgccgcaggaacctagacatcgag
cgccctacctacaccaacctcaaccgcctaatcagccagattgtgtcctccattactgcc
tctctccgctttgatggggccctcaatgtggacctcactgagttccagaccaacctggtg
ccctacccccgcatccatttcccactggtcacctatgcacctatcatctctgctgagaaa
gcctatcatgaacagctctctgtggctgagataaccagctcctgctttgagcccaacagc
cagatggtgaagtgtgacccgagacatggcaagtacatggcctgctgcatgctctaccgg
ggagacgtggtgcccaaggatgtgaatgtcgctattgccgccatcaagaccaagaggacc
atccagtttgtagattggtgtcccacaggcttcaaggtgggcatcaactaccagccaccc
actgtggtgccaggaggggacctggccaaagtccagcgggctgtctgcatgctaagcaac
accacggcgattgcagaggcctgggcccgtctggaccacaagtttgacctcatgtatgcc
aagcgagcctttgtgcattggtatgttggagagggaatggaagaaggggaattttctgag
gccagggaggacctggctgcccttgagaaggattatgaagaagtggggactgattcattt
gaagaagaaaatgaaggggaggaattttaa

KEGG   Loxodonta africana (African savanna elephant): 100665312
Entry
100665312         CDS       T04351                                 

Definition
(RefSeq) tubulin alpha-1 chain-like
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100665312
  09143 Cell growth and death
   04210 Apoptosis
    100665312
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100665312
   04540 Gap junction
    100665312
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100665312
   05012 Parkinson disease
    100665312
   05014 Amyotrophic lateral sclerosis
    100665312
   05016 Huntington disease
    100665312
   05020 Prion disease
    100665312
   05022 Pathways of neurodegeneration - multiple diseases
    100665312
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100665312
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100665312
   03036 Chromosome and associated proteins [BR:lav03036]
    100665312
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100665312
   04147 Exosome [BR:lav04147]
    100665312
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100665312
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100665312
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100665312
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100665312
  Exosomal proteins of other body fluids (saliva and urine)
   100665312
  Exosomal proteins of colorectal cancer cells
   100665312
SSDB
Motif
Pfam: Tubulin_C Tubulin Tubulin_3
Other DBs
NCBI-GeneID: 100665312
NCBI-ProteinID: XP_023403761
LinkDB
Position
Unknown
AA seq 416 aa
MPSDKTIGGGDDSFNTFFSETGTGKHVPRAMFVDLEPTVIDEVCTGTYRQLFHPEQLITG
KEDAANNYAHGHYTISKEITDLVLDRIHKLADQCTGLQGFLVFHSFGGGTGSGFTYLLME
RLSVDYGKKSKLEFSIYPAPQVSTAVVGPYHSILTTHTTLEHSDCAFVVDNEAIYDICRR
NLDIEHPTYTNLNRLISQIVSSITASFRFDGALNVNLTEFQTNLVPYPCIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYHGNVVPKDVNAAIATI
KTKHSIQFVDWCPTGFKVRINYQPPTVVPGGDLAKVQRAVCMLSNTTAIVEAWARLDHKF
DLMYAKHAFVHWYVGDGMEEGEFSEACEDMAALEKDYEEVGVDSVEGESEEEGEEY
NT seq 1251 nt   +upstreamnt  +downstreamnt
atgccaagtgacaagaccattgggggaggagacgactccttcaacaccttcttcagtgag
acaggcactggcaagcatgttcccagggcaatgtttgtagacctggaacccacggtcatt
gatgaagtttgcactggcacctaccgccagctcttccatcctgagcagctcatcacaggc
aaggaagatgctgccaataactatgcccacggccactacaccatcagcaaggagatcact
gaccttgtcttggacagaattcacaagctggctgaccagtgcacaggtcttcagggcttc
ttggttttccacagctttggtgggggaaccggttctgggttcacctatttgctgatggaa
cgtctctcagttgattatggcaagaagtccaagctggagttctctatttacccagccccc
caggtttccacagctgtagttgggccctaccactccatcctcaccacccacaccaccctg
gagcactcagattgtgccttcgtggtagacaatgaggccatctatgacatctgtcgcaga
aaccttgatattgagcacccaacctatactaaccttaaccgccttattagccagattgtg
tcctctatcactgcttccttcagatttgatggtgccctgaatgtcaatctgacagaattc
cagaccaacctggtgccctatccctgcatccacttccctctggccacatatgcccctgtc
atctctgctgagaaagcctaccatgaacagctttctgtagcagagattaccaatgcttgc
tttgagccagccaaccagatggtgaaatgtgacccccgccatggtaaatacatggcttgc
tgcctgttgtaccacggtaatgtggttcccaaagatgtcaatgctgccattgccaccatc
aagaccaagcacagcatccagtttgtggattggtgccccactggcttcaaggttcgcatt
aactaccagcctcccactgtggtgcctggtggagacctggccaaggtacagcgagctgtg
tgcatgctgagcaacaccacagccattgttgaggcctgggctcgcctggaccacaagttt
gacctgatgtatgccaagcatgcctttgttcactggtacgtgggtgatgggatggaggaa
ggagagttttctgaggcctgtgaggacatggctgcccttgagaaggactatgaggaggtt
ggtgtggattctgttgaaggagagagtgaggaagaaggagaagaatactaa

KEGG   Loxodonta africana (African savanna elephant): 100670303
Entry
100670303         CDS       T04351                                 

Gene name
TUBA1B
Definition
(RefSeq) tubulin alpha-1B chain
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100670303 (TUBA1B)
  09143 Cell growth and death
   04210 Apoptosis
    100670303 (TUBA1B)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100670303 (TUBA1B)
   04540 Gap junction
    100670303 (TUBA1B)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100670303 (TUBA1B)
   05012 Parkinson disease
    100670303 (TUBA1B)
   05014 Amyotrophic lateral sclerosis
    100670303 (TUBA1B)
   05016 Huntington disease
    100670303 (TUBA1B)
   05020 Prion disease
    100670303 (TUBA1B)
   05022 Pathways of neurodegeneration - multiple diseases
    100670303 (TUBA1B)
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100670303 (TUBA1B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100670303 (TUBA1B)
   03036 Chromosome and associated proteins [BR:lav03036]
    100670303 (TUBA1B)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100670303 (TUBA1B)
   04147 Exosome [BR:lav04147]
    100670303 (TUBA1B)
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100670303 (TUBA1B)
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100670303 (TUBA1B)
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100670303 (TUBA1B)
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100670303 (TUBA1B)
  Exosomal proteins of other body fluids (saliva and urine)
   100670303 (TUBA1B)
  Exosomal proteins of colorectal cancer cells
   100670303 (TUBA1B)
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100670303
NCBI-ProteinID: XP_010594685
LinkDB
Position
Unknown
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggccaggctggtgtccagattggcaacgcctgc
tgggagctctactgtctggaacatggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagacgactccttcaacaccttcttcagtgagactggcgctggcaag
catgtgcccagggcagtgtttgtagacctggaacccacggtcattgatgaagttcgcact
ggcacctaccgccagctctttcatcctgaacagctcatcacaggcaaggaagatgctgcc
aataactatgcccgcggccactacaccatcggcaaggagatcattgaccttgtcttggac
agaattcgcaagctggccgaccagtgcacaggtcttcagggcttcttggttttccacagt
ttcggtgggggaaccggttctgggttcacctctttgctgatggaacgcctctcagttgat
tatggcaagaagtccaagctggagttctctatttacccagccccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactcagattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgcagaaaccttgatattgag
cgcccaacctatactaaccttaaccgccttattagccagattgtgtcctctatcactgct
tccctcagatttgatggtgccctgaatgtcgatctgacagaattccagaccaacctggtg
ccctatccccgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagattaccaatgcttgctttgagccagccaac
cagatggtgaaatgtgacccccgccatggtaaatacatggcttgctgcctattgtaccgt
ggtgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggattggtgccccactggcttcaaggttggcattaactaccagcctccc
actgtggtgcctggtggagacctggccaaggtacagcgagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgaggggatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggactatgaggaggttggtgtggattctgtt
gaaggagagggtgaggaagaaggagaagaatactaa

KEGG   Loxodonta africana (African savanna elephant): 100670586
Entry
100670586         CDS       T04351                                 

Definition
(RefSeq) tubulin alpha-1A chain
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100670586
  09143 Cell growth and death
   04210 Apoptosis
    100670586
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100670586
   04540 Gap junction
    100670586
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100670586
   05012 Parkinson disease
    100670586
   05014 Amyotrophic lateral sclerosis
    100670586
   05016 Huntington disease
    100670586
   05020 Prion disease
    100670586
   05022 Pathways of neurodegeneration - multiple diseases
    100670586
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100670586
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100670586
   03036 Chromosome and associated proteins [BR:lav03036]
    100670586
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100670586
   04147 Exosome [BR:lav04147]
    100670586
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100670586
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100670586
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100670586
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100670586
  Exosomal proteins of other body fluids (saliva and urine)
   100670586
  Exosomal proteins of colorectal cancer cells
   100670586
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100670586
NCBI-ProteinID: XP_010594676
LinkDB
Position
Unknown
AA seq 451 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGVDSVEGEGEEEGEEY
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccacgtcggccaggctggtgtccagattggcaacgcctgc
tgggaactctactgtctggaacatggcatccagcccgatggccagatgccaagtgacaag
accattgggggaggagacgactccttcaacaccttcttcagtgagactggcgctggcaag
catgtgcccagggcagtgttcgtagacctggaacccacggtcattgatgaagttcgcact
ggcacctaccgccagctcttccatcctgagcagctcatcacaggcaaggaagatgctgcc
aataactatgcccgcggccactacaccattggcaaggagatcattgacttggttctggat
cggattagaaaactggccgaccagtgcacaggtcttcagggcttcttggttttccacagt
ttcggtgggggaaccggttctgggttcacctctttgctgatggaacgcctctcagttgat
tatggcaagaagtccaagctggagttctctatttacccagccccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactcagattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgcagaaaccttgatattgag
cgcccaacctatactaacttgaataggttgataggtcaaattgtgtcctctatcactgct
tccctcagatttgatggtgccctgaatgtcgatctgacagaattccagaccaacctggtg
ccctatccccgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagctttctgtagcagagattaccaatgcttgctttgagccagccaac
cagatggtgaaatgtgacccccgccatggtaaatacatggcttgctgcctgttgtaccgt
ggtgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgtact
atccagtttgtggattggtgccccactggcttcaaggttggcattaactaccagcctccc
actgtggtgcctggtggagacctggccaaggtacagcgagctgtgtgcatgctgagcaac
accacagccattgctgaggcctgggctcgcctggaccacaagtttgacctgatgtacgcc
aagcgtgcctttgttcactggtacgtgggtgaggggatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggtgtggattctgtt
gaaggagaaggtgaagaagaaggagaagaatactaa

KEGG   Loxodonta africana (African savanna elephant): 100670866
Entry
100670866         CDS       T04351                                 

Definition
(RefSeq) tubulin alpha-1C chain
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100670866
  09143 Cell growth and death
   04210 Apoptosis
    100670866
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100670866
   04540 Gap junction
    100670866
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100670866
   05012 Parkinson disease
    100670866
   05014 Amyotrophic lateral sclerosis
    100670866
   05016 Huntington disease
    100670866
   05020 Prion disease
    100670866
   05022 Pathways of neurodegeneration - multiple diseases
    100670866
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100670866
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100670866
   03036 Chromosome and associated proteins [BR:lav03036]
    100670866
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100670866
   04147 Exosome [BR:lav04147]
    100670866
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100670866
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100670866
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100670866
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100670866
  Exosomal proteins of other body fluids (saliva and urine)
   100670866
  Exosomal proteins of colorectal cancer cells
   100670866
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100670866
NCBI-ProteinID: XP_010594690
LinkDB
Position
Unknown
AA seq 449 aa
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDLVLD
RIRKLADQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLTVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAVAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGADSAEGEDEGEEY
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgcgtgagtgcatctccatccatgttggccaggctggtgtccagattggcaatgcctgc
tgggagctctactgtctggaacacggcatccagcctgatggccagatgccaagtgacaag
accattggcgggggagacgactccttcaacaccttcttcagtgagacaggcgctggcaag
catgtgcccagggcagtgtttgtagacctggaacccacggtcattgatgaagttcgcact
ggcacctaccgccagctcttccatcctgaacagctcatcacaggcaaggaagatgctgcc
aataactatgcccgtggccactacaccattggcaaggagatcattgaccttgtcttggac
agaattcgcaagctggccgatcagtgcacaggtcttcagggcttcttggttttccacagt
ttcggtgggggaaccggttctgggttcacctctttgctgatggaacgcctctcagttgat
tatggcaagaagtccaagctggagttctctatttacccagccccccaggtttccacagct
gtagttgagccctacaactccatcctcaccacccacaccaccctggagcactcagattgt
gccttcatggtagacaatgaggccatctatgacatctgtcgcagaaaccttgatattgag
cgcccaacctacactaatcttaaccgccttattagccagattgtgtcctctatcactgct
tccctcagatttgatggtgccctgaatgtcgatctgacagaattccagaccaacctggtg
ccctatccccgcatccacttccctctggccacatatgcccctgtcatctctgctgagaaa
gcctaccatgaacagcttactgtagcagagattaccaatgcttgctttgagccagccaac
cagatggtgaaatgtgacccccgccatggtaaatacatggcttgctgcctgttgtaccgt
ggtgatgtggttcccaaagatgtcaatgctgccattgccaccatcaagaccaagcgcagc
atccagtttgtggattggtgccccactggcttcaaggttggcattaactaccagcctccc
actgtggtgcctggtggagacctggccaaggtacagcgagctgtgtgcatgctgagcaac
accacagccgttgctgaggcctgggctcgcctggaccacaagtttgacctgatgtatgcc
aagcgtgcctttgttcactggtacgtgggtgaggggatggaggaaggagagttttctgag
gcccgtgaggacatggctgcccttgagaaggattatgaggaggttggagcagatagtgct
gagggagaggatgagggcgaagagtattaa

KEGG   Loxodonta africana (African savanna elephant): 100671911
Entry
100671911         CDS       T04351                                 

Definition
(RefSeq) tubulin alpha-1D chain
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100671911
  09143 Cell growth and death
   04210 Apoptosis
    100671911
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100671911
   04540 Gap junction
    100671911
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100671911
   05012 Parkinson disease
    100671911
   05014 Amyotrophic lateral sclerosis
    100671911
   05016 Huntington disease
    100671911
   05020 Prion disease
    100671911
   05022 Pathways of neurodegeneration - multiple diseases
    100671911
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100671911
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100671911
   03036 Chromosome and associated proteins [BR:lav03036]
    100671911
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100671911
   04147 Exosome [BR:lav04147]
    100671911
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100671911
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100671911
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100671911
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100671911
  Exosomal proteins of other body fluids (saliva and urine)
   100671911
  Exosomal proteins of colorectal cancer cells
   100671911
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100671911
NCBI-ProteinID: XP_010600174
LinkDB
Position
Unknown
AA seq 417 aa
MPSDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVIDEVRTGTYRQLFHPEQLITG
KEDAANNYARGHYTIGKELIDLVLDRIRKLADQCTGLQGFLIFHSFGGGTGSGFTSLLME
RLSVDYGKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRR
NLDIERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPV
ISAEKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATI
KTKRTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKF
DLMYAKRAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGMDSVEGEGEEEEGDEY
NT seq 1254 nt   +upstreamnt  +downstreamnt
atgcccagtgacaagaccattgggggaggggatgactccttcaacactttcttcagtgaa
actggggctggaaaacatgtgccccgtgcagtgtttgtagacctggagcccaccgtgatt
gatgaggttcggacgggcacgtaccgtcagctcttccatccagagcagctcatcaccggc
aaggaagatgctgccaataactatgcccgaggccactacaccattggaaaggagctcatc
gacctggtgctggaccgaattcggaagctggctgaccagtgcacagggctccagggattc
ctcatctttcacagctttggagggggtactggctctggcttcacctcgctgctgatggag
cggctctctgttgactatggcaagaagtccaagctggagttctccatctacccggcccct
caggtgtccacagctgtggtcgagccctacaactccatcctgaccacccacaccaccctg
gagcactcagactgtgccttcatggtggacaacgaggccatctatgacatctgccgccgc
aacctggatatcgagcgcccaacctacaccaacctcaaccgcctcatcggccaaatcgtc
tcctccatcacagcttccctgcgtttcgatggggctctcaatgtggacctgacagagttc
cagaccaacctggtcccctaccctcgcattcacttccccctggccacctatgcaccagtc
atctctgcagagaaggcctaccatgagcagctgtcggtggcagagatcaccaatgcctgc
tttgagcctgccaaccagatggtgaagtgtgacccccgtcatggcaagtacatggcctgc
tgtctgttgtaccgtggagacgtggtgcccaaggatgtcaatgccgccatcgctaccatc
aagaccaagcgcactatccagtttgtagactggtgtccaacaggcttcaaggttggtatc
aactaccagccacccactgtggtgcccgggggtgacctggccaaggtgcagcgcgccgtg
tgtatgttgagcaacacgactgccatcgccgaggcctgggcccgtctggaccacaagttc
gacctgatgtatgccaagagggcattcgtgcactggtatgtgggcgagggcatggaagag
ggtgagttctctgaggcccgagaggatatggctgccctggagaaggattatgaagaggtg
ggcatggatagtgtggagggggagggagaagaagaggaaggagatgaatactag

KEGG   Loxodonta africana (African savanna elephant): 100672207
Entry
100672207         CDS       T04351                                 

Definition
(RefSeq) tubulin alpha-4A chain isoform X2
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    100672207
  09143 Cell growth and death
   04210 Apoptosis
    100672207
  09144 Cellular community - eukaryotes
   04530 Tight junction
    100672207
   04540 Gap junction
    100672207
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    100672207
   05012 Parkinson disease
    100672207
   05014 Amyotrophic lateral sclerosis
    100672207
   05016 Huntington disease
    100672207
   05020 Prion disease
    100672207
   05022 Pathways of neurodegeneration - multiple diseases
    100672207
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    100672207
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    100672207
   03036 Chromosome and associated proteins [BR:lav03036]
    100672207
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    100672207
   04147 Exosome [BR:lav04147]
    100672207
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     100672207
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     100672207
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    100672207
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   100672207
  Exosomal proteins of other body fluids (saliva and urine)
   100672207
  Exosomal proteins of colorectal cancer cells
   100672207
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 100672207
NCBI-ProteinID: XP_010600182
LinkDB
Position
Unknown
AA seq 448 aa
MRECISVHVGQAGVQMGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFTTFFCETGAGK
HVPRAVFVDLEPTVIDEIRNGPYRQLFHPEQLITGKEDAANNYARGHYTIGKEIIDPVLD
RIRKLSDQCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLISQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIAAIKTKRSIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDMAALEKDYEEVGIDSYEDEDEGEE
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgcgtgaatgcatctcagtccatgtggggcaggcaggtgtccagatgggcaatgcctgc
tgggagctctactgtctagaacatgggattcagcctgatggccagatgcctagtgacaag
accattggtggaggggatgactccttcactaccttcttctgtgaaaccggcgctggaaaa
catgtgccccgggcagtttttgttgatttggagcccactgtaattgatgagatccgaaat
ggcccataccgacagctcttccatccagagcagctcatcactgggaaagaagatgccgct
aacaactatgcccgtggtcactataccattggcaaggagatcatcgacccggtgctggac
cggatccgcaagctgtctgaccaatgcacaggacttcagggcttcctggtgttccacagc
tttggagggggtaccggctctggcttcacctcgctgctgatggagcggctctctgttgac
tatggcaagaagtccaagctggagttctccatctacccggcccctcaggtgtccacagct
gtggtcgagccctacaactccatcctgaccacccacaccaccctggagcactcagactgt
gccttcatggtggacaacgaggccatctatgacatctgccgccgcaacctggacatcgag
cgcccaacctacaccaacctcaaccgcctcatcagccaaattgtctcttccatcacagct
tccctacgctttgatggggccctcaatgtggacctgacagagttccagaccaacctggtc
ccctaccctcgcattcacttccccctggccacctatgcaccagtcatctctgcagagaag
gcctaccatgagcagctgtcggtggcagagatcaccaatgcctgctttgagcctgccaac
cagatggtgaagtgtgacccccgtcatggcaagtacatggcctgctgtctgttgtaccgt
ggagacgtggtgcccaaggatgtcaatgctgccatcgctgccatcaagaccaagcgcagt
attcagtttgtggactggtgtccaacaggcttcaaggttggtatcaactaccagccaccc
actgtggtgcccgggggtgacctggccaaggtgcagcgcgccgtgtgtatgttgagcaac
acgactgccatcgccgaggcctgggcccgtctggaccacaagttcgacctgatgtatgcc
aagagggcattcgtgcactggtatgtgggtgagggcatggaagagggtgagttctctgag
gcccgagaggatatggctgccctggagaaggattacgaggaagtgggcatcgactcctat
gaggacgaggatgagggggaagaatag

KEGG   Loxodonta africana (African savanna elephant): 104846789
Entry
104846789         CDS       T04351                                 

Definition
(RefSeq) tubulin alpha-3 chain
  KO
K07374  tubulin alpha
Organism
lav  Loxodonta africana (African savanna elephant)
Pathway
lav04145  Phagosome
lav04210  Apoptosis
lav04530  Tight junction
lav04540  Gap junction
lav05010  Alzheimer disease
lav05012  Parkinson disease
lav05014  Amyotrophic lateral sclerosis
lav05016  Huntington disease
lav05020  Prion disease
lav05022  Pathways of neurodegeneration - multiple diseases
lav05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:lav00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    104846789
  09143 Cell growth and death
   04210 Apoptosis
    104846789
  09144 Cellular community - eukaryotes
   04530 Tight junction
    104846789
   04540 Gap junction
    104846789
 09160 Human Diseases
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    104846789
   05012 Parkinson disease
    104846789
   05014 Amyotrophic lateral sclerosis
    104846789
   05016 Huntington disease
    104846789
   05020 Prion disease
    104846789
   05022 Pathways of neurodegeneration - multiple diseases
    104846789
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    104846789
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lav03019]
    104846789
   03036 Chromosome and associated proteins [BR:lav03036]
    104846789
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:lav04812]
    104846789
   04147 Exosome [BR:lav04147]
    104846789
Messenger RNA biogenesis [BR:lav03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     104846789
Chromosome and associated proteins [BR:lav03036]
 Eukaryotic type
  Centrosome formation and ciliogenesis proteins
   Microtubules and associated factors
    Other tubulins
     104846789
Cytoskeleton proteins [BR:lav04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    104846789
Exosome [BR:lav04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   104846789
  Exosomal proteins of other body fluids (saliva and urine)
   104846789
  Exosomal proteins of colorectal cancer cells
   104846789
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3
Other DBs
NCBI-GeneID: 104846789
NCBI-ProteinID: XP_010597190
LinkDB
Position
Unknown
AA seq 472 aa
FACHIVSSCLEDEWVFLSCSGSQRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPS
DKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKED
AANNYARGHYTIGKEIVDLVLDRIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLS
VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLD
IERPTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISA
EKAYHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTK
RTIQFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLM
YAKRAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSVEAEAEEGEEY
NT seq 1419 nt   +upstreamnt  +downstreamnt
tttgcatgccatatagtttccagttgccttgaagatgaatgggttttcctttcgtgttct
ggttcacagcgcgagtgtatctccatccacgtggggcaggcaggtgtccagattggcaat
gcctgctgggagctgtattgcctggaacacggaattcagcccgatggtcagatgccaagt
gacaaaaccatcggcggtggggacgactcgttcaacacgttcttcagtgagaccggggct
ggcaagcacgtgcccagggcagtgtttgtggacctggagcccaccgtggttgatgaagtg
cgcacggggacctaccggcagctcttccacccggagcagctcatcaccggcaaggaagat
gcagccaataactatgccagaggccattacaccatcggcaaagaaatcgtcgacctggtg
ctggaccggatccgcaaactggcggatctgtgcacaggcctgcagggcttcctcatcttc
cacagcttcgggggaggcaccggctcgggctttgcgtctctgctcatggagcggctctcg
gtggactatggcaagaagtccaagctggagtttgccatttacccggcgccccaggtctcc
acggccgtggtcgagccctacaactccatcctgaccacccacacgaccctggagcattcc
gactgtgccttcatggtggacaatgaagccatctatgacatctgtcggcgcaacctcgac
atcgagcggcccacgtacaccaacctcaaccgtctgattgggcagatcgtgtcctctatc
acggcctccctacgattcgacggggccctgaatgtggacctgacggaattccagaccaac
ctggtcccgtacccccgcatccacttccccctggccacctacgccccggtcatctcggct
gagaaggcctaccacgagcagctctctgtggctgagatcaccaacgcctgctttgaaccg
gccaaccagatggtcaagtgtgaccctcgccacggcaagtacatggcctgctgcatgctg
taccggggggacgtggtccccaaagatgtcaatgcggccattgccaccatcaagaccaag
cgtaccatccagtttgtggactggtgcccaactggatttaaggtgggcatcaactaccag
ccccccaccgtcgtccccgggggagacctggccaaggtgcagcgcgctgtgtgcatgctg
agcaacaccacggccatcgccgaggcctgggctcgcctcgaccacaagttcgacctcatg
tatgccaagcgcgcctttgtgcactggtacgtgggggaaggcatggaggaaggcgagttc
tcggaggcccgggaggacctggcggcgctggagaaggattatgaagaggtgggcgtggac
tccgtggaagcagaggccgaggaaggggaagaatactag

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