Lysobacter avium: INQ42_01505
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Entry
INQ42_01505 CDS
T08144
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
lavi
Lysobacter avium
Pathway
lavi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lavi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
INQ42_01505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lavi03400
]
INQ42_01505
DNA repair and recombination proteins [BR:
lavi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
INQ42_01505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
MSP7_C
Motif
Other DBs
NCBI-ProteinID:
QOW22319
LinkDB
All DBs
Position
347746..348813
Genome browser
AA seq
355 aa
AA seq
DB search
MARPIWTGTLSFGLLNIPVSLMAGERRTDISLRMLDSRDQTPIRYERVNSSTGEEVAWKD
IVKAFEYDKGSYVVLEPEDIRSAAPESHDAIEVESFIEASQIDPRYFEKPYVLVPAKKAE
KGYVLLREALNATGRIGVARVVIRTRESLCAVIPHGDALLLLMMRFPQELVDIDEYRIPE
GKPEDYRISAREQKVSEQLIDAMSGDWDPEEYHDEFRQRLHDVIAKRVKDHKVVERPEEE
PAVGEDAATNVVDFMSLLQKSIERKQRTPAAEKTATSKSARKTAAAKKKSATKAPAGKAK
KAEARTGPKKKAASAKSTKAKKTASGKSKGADGKSSGAEASTSAAKSATKRRKVA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcccgatctggaccggcacgttgtccttcggtctgttgaacatccccgtgtcg
ctgatggccggtgagcgccgcaccgacatctcccttcgcatgctcgattcgcgcgaccag
accccgatccgctacgagcgcgtcaattcctccaccggcgaggaagtcgcctggaaggac
atcgtcaaggcgttcgaatacgacaagggcagttacgtcgtgctcgagcccgaggatatc
cgctcggcggcgccggagagccacgacgcgatcgaggtggagtccttcatcgaggccagc
cagatcgatccgcgctatttcgagaagccctacgtgctcgtgccggccaagaaagccgag
aagggctacgtgctcctgcgcgaggcgctcaacgcgaccggacgcattggggttgcgcgc
gtggtcatccgcacccgtgagagcctttgcgcggtgattccgcacggcgatgcgctgctg
cttctgatgatgcgcttcccgcaggagctggtggacatcgacgaataccggatccccgaa
ggcaagccggaggactatcgcatctccgccagggagcagaaggtctccgagcagctgatc
gacgcgatgtcgggtgactgggatccggaggaataccacgacgagttccggcaacgcctg
cacgacgtgatcgccaagcgggtgaaggaccacaaggtggtcgagcgtccggaggaagag
ccggcggtcggcgaggatgccgcgaccaacgtggtcgacttcatgtcactgctgcagaag
agcatcgagcgcaagcagcgaaccccggcggcagagaaaaccgcgacatcaaagagcgcc
aggaaaacagcggcggcgaagaagaagtcggcgactaaggcgcctgccgggaaagcgaaa
aaggccgaggcccgcaccggcccgaagaagaaggcagccagcgccaagtcgacgaaagcg
aagaagaccgcgtccggcaagtcgaaaggcgcggacggaaaatccagcggcgccgaggcg
tcaacgagcgccgccaagagcgccaccaaacgccgcaaggtggcctga
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