Lactobacillus amylovorus GRL1118: LAB52_04770
Help
Entry
LAB52_04770 CDS
T01954
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lay
Lactobacillus amylovorus GRL1118
Pathway
lay03030
DNA replication
lay03430
Mismatch repair
lay03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LAB52_04770
03430 Mismatch repair
LAB52_04770
03440 Homologous recombination
LAB52_04770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lay03032
]
LAB52_04770
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_04770
Enzymes [BR:
lay01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LAB52_04770
DNA replication proteins [BR:
lay03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LAB52_04770
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LAB52_04770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AEA31910
LinkDB
All DBs
Position
938086..941193
Genome browser
AA seq
1035 aa
AA seq
DB search
MQIAALQNLSSFTLLDSPTKVADLIKTAKEKGYSAVGLADINVTYGLVNFYEIAKKEGIK
PLLGMQIRLNGLIDSTQKYDLLVFAKTNAGYHNLLRLSSAINLLTENGQNDKILTLKELT
KYLEDLLVIIPANTRSELVYLFETNQQLGSDYLRDLKKIVSDFYLGVYAAENDQDYLDYV
RSLSKQFDLPLVAVEDSEYLRPRDQFLQKTLRAIRSGQKMQDMVPLAKQDGSHYMVDAEQ
MLERYHRFDLDDAVNNTAKIAEKCNAEVIFQKPVLPKYHQNKFLTSEEYLHYLAQTGLQA
RFGQEKIPAEYQKRLNYELRIINQMGFDDYFLIVWDVINYCHRVKITTGPGRGSACGSLV
SYSLRITEVDPLKYHLLFERFLNPARHEMPDIDLDIPDIHRDTVIKYMYQKYGMDHAAQI
LTFGTLAAKQALRDVGRVFGLTMAEVNKWARAIPFSKGKMTLKQAYEESRELRLLVDATE
ENKLLFRTAMALEGLPRHYSIHAAGLVISDDSIAGISGLQAGPLGIPVTQQTKKYVESLG
LLKIDFLGLRNLTVLGNILDLVRSQGVKIDPNKIPLNDAKTLELFQQGKTDAIFQFESEG
IRRVLRQLHPDNFEDLVAVNALYRPGPMQNIDTFVARKNGKEPVRYPDPSLKQILQPTYG
ILVYQEQVMQTAQILAGFSLGEADILRRAMSKKKQDVIEQEKSKFIAGVVKNGHSKEVGE
RVYHYIEQFANYGFNRSHAVAYTKIAFWLAYLKVHYPAAFYTAMLNSSTSAKAQQYVMQA
QEANIRVLTPDINHSQLEYTLQNNNILVGLKAIKGLRVDFAKEIAANTKPYKSLSDFLRR
IDSKFLQIDAIEALIMAGAFDQIEDNRNELLANCKDIIANVQLTGQNISLSEILGDAPLK
PAEIPTNGEKAEMEEKVLGFATTTTPLVAVQKYAQKFNALPLNQFQFNESGIGVGKLMSL
KRIRTKNDKTMAFAGFADSSSQQEVIIFPAAYEKFNDVLKIGDIYLLGLRTQGDRFDQNK
MQYLLTNLRKVNFKD
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatagctgcactgcaaaatctaagctcatttacattgctagatagtccaaccaaa
gtggcggatttgattaagacggccaaagaaaagggctatagtgccgtaggtttggcggat
atcaatgtaacgtatggtttagttaacttctatgaaattgctaaaaaagaggggattaag
ccacttttagggatgcaaattcgcttaaatggcttgattgatagcacgcaaaaatatgat
ttgctggtctttgcgaaaactaatgcgggctatcataatttgttgcggctttctagtgcg
attaatttattaaccgaaaatggtcaaaacgataagattttaaccctcaaagaactgacc
aaatacttagaggatttattggtaattattcccgctaatactagaagtgaattagtctat
ctttttgaaactaaccagcaactgggcagtgactatttgcgtgatttaaagaaaattgtg
tctgacttttatcttggcgtttatgcggccgaaaatgatcaggactatctcgattatgtt
cgctctttaagtaagcagttcgatttaccattagttgccgttgaagacagcgaatatcta
agaccgcgcgatcaatttttacaaaagactttgcgggccattcgctcaggtcaaaagatg
caggatatggtgccactagctaagcaagacggttcgcattatatggttgatgcagaacag
atgcttgaaagataccatcgctttgatttggatgatgcggttaataacactgctaaaatt
gccgaaaaatgcaatgcagaagtaatttttcaaaagccagttttaccaaaatatcaccaa
aataagtttctaacttctgaggagtatctgcattacttagctcagacaggcctgcaagca
agatttggacaagaaaaaattccggcagaatatcaaaaacgcctcaactatgaattgcga
attattaatcagatgggctttgatgattatttcttaattgtttgggatgtcatcaattat
tgccaccgcgtcaaaattacaacgggccctggaagaggttccgcttgtggttcgcttgtc
tcttattcattaagaatcacagaagtagacccattgaaataccatttattgtttgaacgt
ttcttaaacccagctagacatgaaatgcctgatatcgacctggatattcctgatattcat
cgagatacggttattaagtacatgtatcaaaaatatggcatggatcatgcggcacagatt
cttacttttggtactttagctgctaagcaagccttgcgtgatgtaggccgcgtttttggt
ctaacaatggctgaagttaataaatgggcccgtgctattccgttttctaagggaaaaatg
acgttaaaacaagcctacgaagaatcacgtgaattacgactgcttgttgatgccacagaa
gaaaataagctgcttttcagaacggcaatggcattagaggggttgccgcgacactattca
attcacgcggctggattagtcattagtgatgattcgattgccggaatttcaggcttgcaa
gcaggtccacttggcatccctgttactcagcaaactaagaaatacgttgaatctttgggt
ttattgaaaattgacttcttaggcttgcgtaacttaactgttttgggcaatatcttagac
ttagtgcgtagtcaaggagttaagatagatcctaataagatccctttgaatgacgctaag
acattagaattattccaacagggtaaaactgatgcgattttccaatttgaatctgaagga
atcagacgcgttttgcgtcagcttcatccagataattttgaagatcttgtagcggtaaat
gctttgtatcgtccaggtccaatgcaaaatattgatacgttcgttgccagaaagaatggc
aaagaaccagtacgctatcctgatccaagtttgaagcagatcctgcagccaacttacgga
attttggtttaccaggaacaagttatgcaaacggcacaaattctggctggattttcacta
ggagaggccgacattttgcgccgggctatgtcgaagaaaaagcaagatgtcattgagcag
gaaaagagcaaatttattgctggcgtagttaaaaacgggcactctaaagaagtaggtgag
cgcgtttaccattacattgagcagtttgccaattatggttttaaccgttctcacgctgtg
gcttataccaagatcgccttttggctagcttatcttaaagtacattatccagcagctttc
tatactgcaatgttaaattcttctacttcggctaaggctcagcaatatgtaatgcaggct
caagaagcaaatatccgtgttctaacgcctgatatcaaccacagccaattagaatacacg
ttgcaaaataacaatattttagttggcttaaaggcaattaaaggcttgcgtgtagacttt
gccaaagaaattgcggctaatactaagccgtataagtcacttagtgatttcttgcgtaga
atagattctaaatttttacaaattgatgccattgaagccttgatcatggcgggagcattc
gatcagattgaggataacagaaatgaattgttggctaactgtaaggatattattgcaaat
gtgcaattgacggggcagaatatttcattatctgagattttgggggatgcaccactgaag
ccagctgaaataccaactaacggtgaaaaagccgaaatggaagaaaaagttttgggcttt
gctacgacaacaacgccgctggttgccgttcaaaaatatgcgcaaaagtttaacgccctg
cctttgaatcagttccagttcaatgaatcaggaatcggtgtaggcaagttaatgagtctt
aaaagaattagaactaagaatgacaagacgatggcttttgccggttttgccgattcttca
agtcagcaggaggttatcatttttccagctgcttatgaaaagtttaacgatgttctgaaa
ataggcgatatttatttgcttggattgcggacgcagggcgatcgttttgatcaaaataaa
atgcaatatttgttaactaatctgcgaaaagtaaacttcaaagactaa
DBGET
integrated database retrieval system
