Lycium barbarum (goji berry): 132641348
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Entry
132641348 CDS
T09483
Name
(RefSeq) uncharacterized protein LOC132641348
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
lbb
Lycium barbarum (goji berry)
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lbb03009
]
132641348
Enzymes [BR:
lbb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
132641348
Ribosome biogenesis [BR:
lbb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
132641348
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
Fer4_12
Radical_SAM_2
DUF5703
RlmN_N
Motif
Other DBs
NCBI-GeneID:
132641348
NCBI-ProteinID:
XP_060214289
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Position
5:122943141..122951854
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AA seq
456 aa
AA seq
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MRRIRFSNGCSTSALLGTTTFLFSNYTKSCSVKPKSFLKLFPSTTPLFTTPHYRLVTTAQ
HSSYTSHVLPTPQTNNLSGGDGQNGYPMKDSKVVLKGMRYTDLEKWVQSHGYKPGQALML
WKRLYGDNIWAQSSEELEGLNKDFRKMLSEHAEFKTLNLIEILTASDGTKKMLFKLEDDL
VIETVLIPCERGRNTVCISSQVGCAMNCQFCYTGRMGLKRNLSTSEIVEQAVLARRLLSS
EVGPISNVVFMGMGEPLHNIENVIKAADILVDEQGLHFSPRKVTVSTSGLVPQLKRFLRE
SNCALAVSLNATTDEVRSWIMPINRKFNLNLLLGTLREELQSKHKYKVLFEYVMLAGVND
SVEDAKRLIDLVQGIPCKINLITFNPHSGSFFKPTKKEKILEFRDILAEAGCVVLFRWSR
GDDQMAACGQLGKPGEIQAPMLRVPSQFQAVLEAAV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgaggagaattcgcttctccaatggctgcagcacctctgctttgcttggaacaactact
tttctattctccaattacacaaaatcttgttcagtaaaacccaaatcttttctaaagttg
tttccttcaacaacaccccttttcactactccccattatagattagttacaacagctcaa
cattcttcttatacctctcatgttctaccaacacctcaaactaacaacctttctggaggt
gatggacaaaatgggtatccaatgaaggattcgaaagtggttttgaaagggatgagatat
actgatcttgagaaatgggttcagtcacacggttataagcctgggcaggcactgatgtta
tggaaacgtctgtatggggataatatttgggctcaaagcagtgaggaactagaaggtttg
aataaagatttcaggaaaatgttgagtgaacatgctgaatttaagacgttaaacttgata
gaaattctgacagcgtctgatggaactaaaaagatgttattcaagttggaagatgatctg
gtaatagaaactgttctgataccttgtgagcggggcaggaacaccgtctgtatatctagt
caagtaggttgtgccatgaattgccagttttgctacactggcagaatgggtctgaagaga
aatttatctacttctgagatagttgagcaggctgttttagctcgacggttattatccagt
gaagttgggccaattagcaatgttgtgtttatgggaatgggagaaccacttcacaacatt
gagaatgtcataaaagctgcagacatattggtcgatgaacaaggacttcattttagtcct
cgaaaggtcaccgtttctacaagtgggcttgtgccccagcttaagcgctttcttcgcgag
tctaattgtgctttggcagtcagtttgaacgctacaactgatgaggtcagaagctggatc
atgccaattaaccgcaaatttaacttgaacttgcttcttggaacactaagagaggagctt
caatcaaaacataagtacaaagttctatttgagtatgtaatgcttgctggagttaatgat
agtgttgaggatgcaaagagactaatcgatcttgtccagggcattccatgcaagattaac
ctgatcacttttaaccctcattctggatctttcttcaaaccgactaaaaaagagaagata
ctcgagttcagagacatcctcgctgaagcaggatgtgtcgtgcttttccgatggagtaga
ggagacgatcaaatggccgcctgtggtcagctaggtaaaccaggtgaaatccaagctccc
atgcttcgagtgccttctcaatttcaagcagtcttggaagctgcagtgtga
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