Laccaria bicolor: LACBIDRAFT_316073
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Entry
LACBIDRAFT_316073 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10842
CDK-activating kinase assembly factor MAT1
Organism
lbc
Laccaria bicolor
Pathway
lbc03022
Basal transcription factors
lbc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
LACBIDRAFT_316073
09124 Replication and repair
03420 Nucleotide excision repair
LACBIDRAFT_316073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbc03021
]
LACBIDRAFT_316073
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_316073
Transcription machinery [BR:
lbc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
LACBIDRAFT_316073
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
LACBIDRAFT_316073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MAT1
zf-C3HC4_5
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_UBOX
zf-RING_4
zf-rbx1
CCDC47
Motif
Other DBs
NCBI-GeneID:
6073871
NCBI-ProteinID:
XP_001878296
JGI:
316073
UniProt:
B0D3V7
LinkDB
All DBs
AA seq
399 aa
AA seq
DB search
MTSWLQGKTVRKGGLISSASHSRSSTPHVQSTSTTVFGGGVKDPSGRTSEYFVSLYYNIT
FFTLLTLFLKSMDDQCPVCKSDRYLNPKLRLLVSSCYHKMCESCIDRLFTLGPAPCPICN
KVLRKLAFTPQTFEDLGVEKEVAVRRRIAKEFNKRREDFPDLRSYNDYLEQVEDITFNLI
NEINIPQTEARIAAYRAENAALIELNVQREEAYARALQEQEEGERRERESRALELRREEE
EEREEREKDRREIIDKLETSDKSASKLIAKSRANALKRSSARAASTSVLQSNAKLLRSRA
ALGTNVQDVPHVPLQDDWYAYEDKFEIRPGGYDDIFSEAVRKDREGVMRGGGYMVEEAWE
RALRCAVAALDLPPLVGLDHPSALPLGLDVNGDVIMQSI
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctggttgcaaggcaagaccgttcgaaagggtggattaatatcttcagcttca
cattcaagatcatcaacacctcatgttcagagcacttcaactaccgtctttggtggtggt
gtcaaggatccatctggtagaacttcagagtactttgtgagcttgtactataacataacc
ttcttcactcttcttaccctctttctcaagtctatggacgaccagtgtcccgtctgcaag
agtgaccgttatttaaatccaaagcttcgtctgctggttagttcatgctaccacaaaatg
tgcgaatcttgcattgatcgccttttcacccttggtcctgcaccttgtccaatatgcaat
aaagtattgcgaaagctggctttcactcctcaaaccttcgaggacttgggtgtcgagaaa
gaggtggctgtcaggagaagaatagcaaaagaatttaacaaacggagagaggactttcct
gatcttcgttcttacaacgactaccttgaacaagtcgaagacatcacattcaatctcatc
aatgagatcaatattccgcagacagaggctcgcatagcagcataccgtgctgaaaatgcc
gctctcatcgagctcaatgtccagcgggaagaagcctatgcccgtgctcttcaagagcaa
gaagaaggcgaacgacgagagagagaatcgcgtgcactagagcttcgcagggaggaggaa
gaggaacgcgaggagcgagaaaaagacagacgcgaaatcattgataaactcgaaacaagt
gacaagagtgcttcaaaactcattgcaaagagtcgtgcaaatgccctgaaacgatcctct
gctcgtgcagcgtcgacatctgtattgcagagcaatgccaagctcttgagatcgagagcg
gctcttgggaccaatgtgcaagacgtcccacatgttccattgcaggacgattggtatgcc
tacgaggacaagtttgaaattcgcccaggcggctatgacgatatttttagtgaagctgtt
cgcaaggatcgggaaggggttatgaggggtggaggttacatggtggaggaggcatgggag
cgggctttgagatgtgcggtggcggccctggatttaccgcctctagtggggcttgaccat
ccgtctgcattaccattgggactagatgtcaatggagatgtgataatgcaatctatttga
DBGET
integrated database retrieval system