Laccaria bicolor: LACBIDRAFT_316078
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Entry
LACBIDRAFT_316078 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10884
ATP-dependent DNA helicase 2 subunit 1
Organism
lbc
Laccaria bicolor
Pathway
lbc03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
LACBIDRAFT_316078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbc03041
]
LACBIDRAFT_316078
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_316078
Spliceosome [BR:
lbc03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
LACBIDRAFT_316078
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
LACBIDRAFT_316078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_C
SAP
SAP_new25
VWA_2
Imm5_like
Motif
Other DBs
NCBI-GeneID:
6073873
NCBI-ProteinID:
XP_001878299
JGI:
316078
UniProt:
B0D3W2
LinkDB
All DBs
AA seq
653 aa
AA seq
DB search
MPPYDDWNKFDDEDDEELQDTLFFESKKDVILFCIDCSESMLALYDDPNYEDVQTCHLYA
ALEAAMQIQKKKIIVGPNDSVGILLFNITRKSEQAQSHASEIKKNTFVYQPITPLGAPKV
QELIQLLDAAREDPNELTKTFPPLVGKRVPMGDVFTSCNWVLRDGAPKTASKRVFLITDE
DDPHAGPGSKQLITSARTTLIDLTQAGVTVEPFFISTENKPFHVSKFYSSVLLPSNLNDE
DELQEDSSVLPESISISRIEDLLAQMRFHEVPKRAQYSVPLQLGEGFTIGVKGYGLVTEQ
KKGAYKYFVDLGDRMEVATVKTTYIDEDQEAEVDKAKIFYGPALGAAAANDDEDNQDADD
GFGTRAVKYGNRPFYTAEEIRSFRTLGLEPGIKLLGFKDRTELAFEDNIKHSQFIYPDEM
SYSGSKRTFSALLKSMIKKEKIGLALALTRRNSSPIFCYLLPQEEKVDDSGWSEPAGFHI
IPLPFADDIRSAPIEEGFRASEDLKDYARAWIDKLSVKNGTYPPDSYPNPALAYHNAQLQ
ASAFREQYDPDSFEDLTAPKLEMIHKRAGNLLGEWKSAVNNDESANVTVATTGSKRKADV
TVDEAEIRSKYDAGALAKLRVDQLKEFLKAKGQAVSGKKAELMERVAEWFDAH
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcccccctacgacgattggaacaagtttgacgacgaagacgatgaagagctgcaggat
actttgttctttgaaagcaagaaagatgttatacttttctgcatcgactgctcagagtca
atgctcgccctctatgatgacccaaattatgaggatgtgcaaacttgtcatctttatgct
gcacttgaagctgcaatgcaaattcagaagaagaagattattgtcggtccaaacgactca
gttggcatacttctcttcaacatcaccagaaagtcggagcaagcccaaagccatgcttca
gaaatcaagaaaaacacgttcgtttatcaaccgatcactccactgggtgcgcccaaggtt
caggagttgatacaattgcttgatgctgcccgcgaagatcctaatgagttgaccaagacg
tttccgcccctggtaggaaagcgagttcctatgggggatgtattcactagttgcaattgg
gtcttgcgtgatggagctccaaagaccgcgtcaaagcgtgttttcttaatcacggatgag
gacgatcctcatgcggggccaggcagcaaacagttgattacttctgcccgtaccactttg
attgacttaacacaagcaggtgtcacggttgaacctttcttcatcagcactgaaaacaaa
cctttccacgtctccaaattttactcgtctgttctccttccgagtaatcttaatgacgaa
gatgagctacaagaggattcctccgtcttgccagagtccatttctatctctcgaattgaa
gatttattggcccagatgcgctttcacgaggtccccaagcgtgctcaatacagtgtccca
ttacaattaggtgaaggattcacgattggcgtaaagggctacggacttgtcacggaacaa
aagaaaggggcgtataaatattttgtcgaccttggagaccgaatggaagtcgccactgtc
aaaacaacatacattgacgaggaccaagaagccgaagtcgacaaagcaaagatattttac
ggccccgcattgggtgcagcagcagccaatgacgatgaggacaatcaagacgcagacgac
gggtttggtacccgggctgtgaaatatggaaatcgcccattctacactgcggaggaaatc
agatcatttcgaaccttgggtcttgagcctggcatcaaactccttgggttcaaagaccgc
accgagttggccttcgaggacaatatcaagcattcccagtttatttatcctgacgagatg
tcatattctggaagcaagcgcactttcagcgcgctactcaagagcatgattaagaaagag
aagattggacttgctctagcgctaactaggcggaattcatcgcctattttctgctaccta
ctgccacaagaagagaaagtagacgacagcggatggagtgaacctgcggggtttcatatc
attccgcttcccttcgccgacgacatccgctcagctccaatagaagaaggttttcgagcg
tcggaggacctcaaagattacgcccgtgcgtggattgacaagctttcagtgaagaatgga
acatatccaccagattcatatcccaatcccgcccttgcgtatcataacgcacaacttcaa
gcaagcgcattccgcgagcagtacgaccccgactctttcgaagatttgacagcgccgaaa
ctcgagatgatccacaagcgtgcgggaaatctactgggcgaatggaaatctgcagtcaac
aatgacgagtcagctaatgttactgttgcgaccactggatctaaacgtaaagcggacgtt
actgtcgatgaggccgagattcgcagcaagtatgacgccggcgcccttgcaaagttacgc
gtagatcaactcaaagaattcctcaaagcaaaaggccaagcagtctccgggaaaaaggcc
gaattgatggagcgcgtcgcggaatggtttgatgcacattga
DBGET
integrated database retrieval system
