Leptospira biflexa serovar Patoc Patoc 1 (Paris): LEPBI_II0133
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Entry
LEPBI_II0133 CDS
T00693
Name
(GenBank) Putative helicase, ATP-dependent
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
lbi
Leptospira biflexa serovar Patoc Patoc 1 (Paris)
Brite
KEGG Orthology (KO) [BR:
lbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbi03019
]
LEPBI_II0133
Enzymes [BR:
lbi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
LEPBI_II0133
Messenger RNA biogenesis [BR:
lbi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LEPBI_II0133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
Flavi_DEAD
ResIII
AAA_19
HA2_N
nSTAND3
AAA_30
Herpes_ori_bp
Motif
Other DBs
NCBI-ProteinID:
ABZ99669
UniProt:
B0STY5
LinkDB
All DBs
Position
II:complement(129774..132239)
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AA seq
821 aa
AA seq
DB search
MNSDFETFPVLSALQKIVDSIQNYPVTILDAPPGSGKTTALPLELLHSGIAQGKKICILE
PRRIAAKNAAKRMSQSIGEPVGNTIGYRVRFDSQTNHNTKIEFLTDGILTRYLLSDPELS
EYGLLIFDEFHERRLESDLCFALARKSQEIFRNDLKILIMSATLEGQNFSKIGIPNPPIQ
VSMETHPLEIFYMGESKKNNQIRLLDLIPKATKQMEGDILVFLSGKKEILDLKYRLESMP
SVHESSVVLPLFGDMSLSDQEKVFLPDTKGKKKIILSTNIAESSVTIPGVRVVFDTGFFK
HSVFDADSGITHLVRDRISLSSAKQRAGRAAREGKGFVYRLWSKEEESSFYDRTKPEILE
GDLDRLVLEVKSFGEEIHSLPFLDPPNKGSMLLSIERLKQLGCLDENDQLTSLGKNALQY
PVPIRLGSILSRLPKHEGTSIADIISILGKESQGTEAKEFFKSASPNQFSLELKNVYEQI
MNIFKHKSENRTHTKQFHRDHYICLGFPDRIAKRKEKEGKEYKLSNGKIGFLNSNLLELP
EFLIALDTFSFGQTLYITQYLPVSLDLIEDCLENQIKIRQNPEIRTNQKEESFLIVKEER
SIGELVLGSKELHKPNPHSIQTALEGYLLDLDWESEWKKKEDLIHYYNRVLFLVQNGVLD
LNVSFEHLKSNAKDWLFPFLNFETQKFNLSHLPFLEAFKAYVGYENQSLIQKEAPSSIQV
PSGSQIPIQYTNNEPELHVKLQELFGLKQLPNLAKGKVKILIHLLSPARRPVQITKDLES
FWNIGYHEVKKELKGRYPKHPWPDKPWEAVPTKHLNHNKRS
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgaactctgatttcgaaacattcccagtactttccgccttacaaaagatagttgattcc
attcaaaactaccctgtcactattttggatgcaccgccaggttccggaaaaaccacagct
ctacccttggaactattacattcgggtatcgcacaaggtaaaaaaatttgtatcctagaa
cccaggcggatcgcggctaaaaatgcagccaaacgcatgagccaatcgattggggaaccc
gtaggaaacacaattggataccgagtccgttttgactctcaaaccaatcacaataccaaa
attgaatttttgacagatgggatcttgactcggtatttactttcagatcccgaactttcg
gagtatgggctcttgatttttgacgaattccatgaacgtcgattggaatcggatctctgt
tttgccttggcacgaaagtcacaagaaatctttcgtaacgacctaaaaattctcatcatg
tcagcaaccctcgaaggacaaaacttttctaaaataggaatcccaaacccaccaatccaa
gtcagtatggaaacccacccactcgagattttttatatgggggaatcgaaaaaaaataat
cagatcagactcctcgatttaatcccaaaggccacaaaacaaatggaaggtgatattttg
gtatttttgtctgggaaaaaagaaattttggacttaaaataccgattggaatcgatgcct
tcagttcacgaaagttctgtcgtacttcctttgtttggtgatatgagtttatctgaccag
gaaaaggtatttttgcctgatacaaaaggtaaaaagaaaatcattttatccaccaatatt
gcagaatcttccgttacgatcccaggtgttcgtgttgtttttgacacaggttttttcaaa
cattctgtatttgatgccgattctggaatcacacacctggtcagggatcgcatcagcctg
agtagtgccaaacagagggcaggtcgtgcggcaagagaaggaaaaggttttgtttatagg
ctttggtcaaaagaagaagaatcaagcttttacgatcgcacgaaaccagaaattttagaa
ggtgatttagatcgcttagtcttagaagtaaaatcttttggagaagagatccactcatta
cccttcctagatccaccaaacaaaggttccatgctactttccattgaacgactgaaacaa
ttgggatgtttggatgagaatgaccaattgacttcgctcgggaaaaacgccctacaatat
ccagtaccaattcgattaggaagcattctatctcgattgccaaaacacgaaggaacttcc
attgccgatatcatttccattttgggaaaggaatcccaaggaacagaagcgaaagaattt
ttcaaatcggcttcacccaatcagttttctttggaattaaaaaatgtttatgaacaaatc
atgaacatttttaaacataaaagtgaaaatagaactcacacaaaacaatttcaccgcgac
cattatatttgcttaggttttcccgatcggatcgccaaacggaaggaaaaagagggaaaa
gaatacaaactttccaatgggaaaataggattcttaaattcaaacttgttggaactacca
gaatttctcattgctctagatacattttcatttggacaaactctttatatcacacaatac
ctacctgtttccttagacctcatcgaagattgcctcgaaaatcaaatcaaaatccgacaa
aatcctgagattcggaccaatcaaaaagaagaatcttttttaatcgtgaaagaagaacgt
tcgataggtgaacttgttttaggatccaaagaattacacaaaccaaatccacattcgata
caaacggcattggaaggatatttgttagatttggactgggaatctgaatggaaaaaaaaa
gaggatctgattcattattacaaccgagtattgtttctggttcagaatggagttttagat
ttaaatgtttcattcgaacacttaaaatcaaatgccaaagattggttattcccgttttta
aactttgaaacacaaaaatttaatttgtctcatcttccttttttggaagcatttaaggcg
tatgttggttatgaaaaccaatccctcatccaaaaagaagctccctcttccatccaagta
ccttcgggttctcaaattccaatccaatatacaaacaacgaacctgagttacatgtcaaa
ttacaagagttatttggtctaaagcagttacccaatttggcaaaaggaaaagtaaaaatt
ttaatccatttattgtcaccagcgagaaggccagtccaaatcacaaaagacctagagagt
ttttggaatattggatatcatgaagtgaaaaaggaattaaaaggaaggtatccgaaacac
ccttggcctgataaaccttgggaagcagttccaacaaaacatttaaatcacaacaaacgt
tcgtaa
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