Leptospira borgpetersenii JB197: LBJ_2783
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Entry
LBJ_2783 CDS
T00404
Symbol
dnaE
Name
(GenBank) DNA-directed DNA polymerase, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lbj
Leptospira borgpetersenii JB197
Pathway
lbj03030
DNA replication
lbj03430
Mismatch repair
lbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LBJ_2783 (dnaE)
03430 Mismatch repair
LBJ_2783 (dnaE)
03440 Homologous recombination
LBJ_2783 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbj03032
]
LBJ_2783 (dnaE)
03400 DNA repair and recombination proteins [BR:
lbj03400
]
LBJ_2783 (dnaE)
Enzymes [BR:
lbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LBJ_2783 (dnaE)
DNA replication proteins [BR:
lbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LBJ_2783 (dnaE)
DNA repair and recombination proteins [BR:
lbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LBJ_2783 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
tRNA_anti_2
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
ABJ77190
UniProt:
Q04PI0
LinkDB
All DBs
Position
1:complement(3297464..3300907)
Genome browser
AA seq
1147 aa
AA seq
DB search
MQHVKENGMSSVAMTDHGNMFGAVEFYNEATKQGIKPIIGSEFYVSPNRKQETEMVKIAD
GSAYHLILLAKNEEGYKNLIRLSSKSYTEGFYKKARIDYDLLAQHNGGLVCLTACLAGEV
NRKILEGKIDESFQLAGKLNEIFRKEDFYMEIQNHGIPEQMTVAKQIYDFGKRTGIPLVV
TNDSHFLKKDDQEAQDILLRIGMQKRITDPMEFGFNGEFYVKSPDEMARVFPEIPEAFYN
TLEISNKVDLKLQFGNYLLPEFEVPEGYDADSYLEKLIWEGIGRKYPNLSPEIKDRVVFE
LNTIKNMKFAGYFLIVQDYINYAKRNGIPVGPGRGSAAGSIVAYALGITNVEPLQHNLLF
ERFLNPDRKDMPDIDTDFCVERREEVINYIRRRYGEEKVGQIITFNSLAAKAALKDVARV
LNLPFGEANEMTKAFPNKLGMSIAEALTTSSELKNFSEKDDINHKIFAIAQRLEGNYRQP
GRHAAGVVISPYPLEEVVPLSTVAEKERPGSRSIVTQYDKNNLESIGLIKMDILGLKNLT
TLDYAIKLIERRRGVRIDLDEIPYNDANTYALLRKANTLGIFQLESTGITDLVAKSQVNN
FDEIVALIALYRPGPMGEGMLDEYLDRKSGRKQVTYPHPSCEPILKETFGVPVYQEQVMS
ISRVVGGFSVGDSDVLRKAMAKKKADLMEKLKYQFVEGAVKQGIQEKVAKDFFEQLERFG
GYGFNKSHSVAYAIITYQTAYLKANYTIEYLTALLASDHGKTTDIVKYINNAREMGIRIL
NPDVSESQASFNVIDDATIRFGLSAMKGVGETAANSIIEARDKAGNFKTLQDFALNIDTR
LINKKVFEALIQAGALDSFGYTRKCLFESVDSILTFAQREQERTNEGQFSLFGVGESSFT
LNLPKDALEWEIDEKLRREKAIAGLYLSGHPLDKYEKQLKSLRTIPIEKFDNLKSGSKVE
VAGIISSKNIKLSKRNEEFANFKLEDRTGEIECVAFAKTYQKYKEFIKEDQAIFIKGDLD
KIEVGDTELRGQVKVNSIEILDDATIEDKLEKSLHLRLEERHTEDPELIPKLYALLACYK
GESSVYFHIVEDREEKRVIRAHDTYSIQPINELFLRLADLLGDRSVFYSVGEQLKVINKN
QVAGNVG
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgcagcacgtaaaagaaaacggtatgtcatcggttgcgatgaccgatcacggaaacatg
tttggtgccgttgaattttacaatgaagcgacgaaacaaggtatcaaaccgattattggt
agcgaattttacgtttctccgaatcgaaaacaagaaacggagatggtaaagatcgcggac
ggaagtgcatatcatctaattcttctcgcaaagaacgaagaaggttacaaaaatttaata
cgtctttcaagcaagtcctacacggaaggtttttataaaaaggcgagaattgactacgat
ctactcgctcaacacaatgggggccttgtctgtttgacggcttgtcttgcgggtgaagtc
aatcggaaaattctagaaggaaaaatcgacgagtcttttcaattagccggaaaattaaat
gagatcttccgtaaagaggatttttatatggaaatccaaaatcacggaattccggaacag
atgaccgtggcaaaacaaatctacgactttggaaaaagaaccggcatccctcttgtagtt
acaaacgattctcattttctaaaaaaagacgaccaagaggctcaggatattcttcttaga
atcgggatgcaaaaacgtattacagacccgatggaattcggctttaacggagaattctac
gtaaaaagtccggatgagatggcgagggtttttcccgaaattccggaagctttttataat
acattagaaattagtaataaagtggatttgaaacttcaatttggaaactatcttctcccc
gaatttgaggtcccggaaggatatgatgcggattcttatcttgagaaattaatctgggaa
gggatcggaagaaagtatcctaacctttctccggaaattaaggatagagttgtcttcgaa
ctgaatacgattaagaatatgaagtttgccgggtacttcttaatcgttcaagattatatc
aattatgcaaaaagaaatggaattcctgttggtccggggaggggttctgccgccggttcc
atcgtagcctacgcgctcggaatcacgaatgtggaacctctccaacataatcttcttttt
gaaagatttttgaatcccgaccgtaaggatatgcctgatatcgataccgatttttgtgtg
gaacgacgggaagaagtcatcaattacattcgcagaagatacggggaagaaaaagtcggt
caaattatcacgttcaattctctcgcggcaaaagccgctctcaaagacgttgctcgcgta
ttaaatcttcctttcggagaggcgaatgagatgaccaaggcattcccgaacaaactcggg
atgtccattgcagaagcgctcacaacttcttccgaattgaagaacttttctgaaaaagac
gatatcaatcataaaatctttgccatcgctcaaagacttgaaggaaactatcgtcagccc
ggaaggcatgctgccggtgttgtgatttctccttatccattggaagaggtcgttccactt
tccacggttgcggaaaaagaaagaccgggttctcgatccatcgtgactcaatacgataaa
aacaacttagaaagtatcggtttgatcaagatggatatcttgggtctgaagaacttaacg
accttggattacgcgatcaaactcatcgaacgaagaagaggggttcgaattgatctcgac
gaaatcccttacaatgatgcgaacacatatgctctccttagaaaagcgaacacactcggt
atattccagttagaatccacggggatcaccgatctagttgctaaaagtcaagtgaacaac
tttgacgagattgtcgctttgatcgcattatatcgtcccggccctatgggtgaaggtatg
ttggacgaatatttggatcgtaaatccggaagaaagcaagtcacatatccacatccttct
tgcgagccgatactgaaagagactttcggagttcccgtttatcaagagcaagtgatgagt
atctcccgggttgttggaggattttcagtcggagattcggacgtattgcggaaggcgatg
gcaaagaagaaagccgatttgatggaaaaacttaaataccaattcgtggaaggggccgta
aaacaaggcattcaagaaaaggttgcaaaggattttttcgagcaattggaaagattcggc
ggttatggattcaacaaatctcactccgtagcctatgcaatcatcacataccaaaccgct
tatttaaaagcgaactatacgatcgaatatcttactgcacttcttgcatcggatcatggt
aaaactaccgatatcgtaaaatacattaacaacgcgagagagatgggaattcgaattctc
aatccggacgtttccgaatcacaagcttctttcaatgtaattgatgatgctacgattcgg
ttcggactttccgcgatgaaaggtgtgggtgagaccgcggcaaacagtatcattgaagca
agagataaggccggaaatttcaaaacccttcaggattttgccctcaacatagatacgagg
ttgattaacaaaaaggtttttgaagctctcattcaagcgggagctttggattctttcggt
tatactcggaaatgccttttcgaatcggtggattctattcttacttttgctcaaagagag
caggaaaggacaaacgaaggacagttttctctttttggggtaggggaaagttctttcaca
ctcaaccttcctaaggacgcgcttgaatgggagatcgacgaaaagttaaggcgcgaaaag
gcgatagccggtctttatctttccggtcatccgcttgataaatacgagaaacaactcaaa
agtttaaggacgattccgattgaaaaattcgacaatctaaaatcaggaagtaaggtggag
gttgcaggaattatctcttctaagaacataaaacttagtaaacgaaacgaagagttcgca
aatttcaaactcgaggatcgaactggagagatcgaatgtgtcgcattcgcgaaaacgtat
cagaaatataaggaatttataaaggaagatcaagcaatctttatcaaaggggacttggat
aaaattgaagtgggagatacggaactccgcggacaggttaaagtcaacagtatcgaaatt
ttagacgatgcaacgattgaagataagctcgaaaaatcgcttcatcttcgattggaagaa
agacacacggaggatccggaactgattccgaaattgtacgctttacttgcttgttataaa
ggggaatcttccgtttattttcacatcgtggaagatcgggaagaaaaaagagttattcgc
gctcacgatacgtattcgatccaaccgatcaatgaactctttctccggttggcggatctt
ttaggggaccgttccgttttttactccgttggggaacaactcaaagtaatcaataaaaat
caggttgccggtaacgttggttag
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