Bombilactobacillus bombi: DS830_00175
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Entry
DS830_00175 CDS
T06522
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
lbm
Bombilactobacillus bombi
Pathway
lbm03420
Nucleotide excision repair
lbm03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
DS830_00175
03430 Mismatch repair
DS830_00175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbm03400
]
DS830_00175
Enzymes [BR:
lbm01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
DS830_00175
DNA repair and recombination proteins [BR:
lbm03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
DS830_00175
MMR (mismatch excision repair)
Other MMR factors
DS830_00175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
UvrD-helicase
UvrD_C_2
AAA_30
Viral_helicase1
UvrD_C
NACHT
DEAD
AAA_11
AAA_22
SMC_N
FtsK_SpoIIIE
ResIII
Motif
Other DBs
NCBI-ProteinID:
AXX64019
UniProt:
A0A347SPR0
LinkDB
All DBs
Position
complement(46455..48734)
Genome browser
AA seq
759 aa
AA seq
DB search
MQFPNESKQAEQRRVDFVTQLIEQQLQETSADIDKAQHERRQVELNFGANTRANYIETDD
IIETNATLQQQRQLMTSAVSNEEILQHKEKELHALEGSPYFGRIDIQEAGENDTLYIGTA
SLSDENGEFWVYDWRAPIASIYYNGTLGTVKYESPMGTQNVDLQRKRQFSIRQGHIDNMF
DTNETIGDEILKNALGQASSAQMKNIVATIQQSQNQIIRDTKSELLIVQGAAGSGKTSTI
MQRIAYLLYHSRQQLNAEQIILFSPNNLFSNYIAEVLPSLGENNMRQVTLQTFLARRLHG
LKIQTLFERFEQEQTTFAVSTQQIRQYKDSIEFAQALQKYAQHADLSLAFTDLIFEGQVF
FTKKQIQDIYQQLPQALASADKFLQTKNHLIKQLQHFLHEEEQADWVIDAIDNLSSSQYQ
AIDQQEHLEQYSSQQQQHILARYLVKQHYLPVYDAIYNDYFFDVFQLYQHFLSHLQPAAI
TPSIWQEMIVEISANLERHYLQLDDATAILYLQQLVTGSGQNQRIKYLFIDEMQDYSALQ
LAYIQNSFPNAKLTLLGDIEQNVYAHDTLSQQRFYNLTKLIPHKKSTLITLNQSYRATAA
ITNLAKQFIPSGAKIQAFNRSGKTPILFSGDEQKLPNFTLKLAQQQVQNQRRVAIITKTN
QQAQHLAEFWGNHAQLLQEQHTKIPQGIVVLPVYLAKGLEFDSVIGYDVSTFNYHSDGDC
GILYTIATRALHELFFVCGPQRAAIFNQVKPHSLIFKKF
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcagtttcccaacgaaagtaaacaagctgaacaacgacgtgtagattttgtcacgcaa
ttaatcgagcaacaattacaagaaaccagcgccgatattgataaagctcaacatgaacgt
cgacaagtagaattgaactttggagcgaatacgcgcgctaattatatcgaaacagatgat
attattgagactaatgccactttacaacagcaacgccaattgatgactagtgccgttagt
aatgaagagattctgcaacataaggaaaaagaattacacgcgctagaaggatccccttac
tttggtcgtattgacattcaagaagctggcgaaaatgacactctatatatcggcactgct
tctttaagtgatgaaaatggtgaattctgggtttatgattggcgagcacccattgccagc
atttattataatggcactttaggtactgttaaatacgaatcacccatgggcactcaaaat
gttgatttgcagcgcaaacgtcagttttcaattcggcaaggtcatattgataatatgttt
gacaccaatgaaactattggtgacgaaattcttaaaaatgctcttggtcaagctagcagc
gcgcaaatgaaaaatattgttgctactattcagcaatcacaaaatcaaattattcgtgac
accaaatcagaattactaattgttcaaggtgctgccggctcaggcaaaacctctactatt
atgcaacgaattgcttatttgctttatcatagtcgacaacaattaaatgccgaacaaatt
attttattttcaccgaacaatcttttttctaattatattgccgaggtattgcccagctta
ggtgaaaataatatgcgacaagtcactttgcaaacctttttagcccggcgtttgcatgga
ttgaagattcagacattatttgaacgtttcgaacaagagcaaaccacttttgctgtaagc
actcaacaaattcgtcaatataaagatagcattgaatttgcacaagctttacaaaaatat
gctcaacacgctgatttaagtttagcatttacagacttaatatttgaagggcaggttttt
tttactaaaaaacaaattcaagatatctatcaacaattaccacaagccttagcgagtgct
gataaatttttacaaactaaaaatcatttaatcaaacaattacaacactttcttcatgaa
gaagaacaagctgattgggttattgacgcgattgataatctctctagttctcaatatcaa
gcaattgatcaacaagaacatctggaacaatactctagtcaacaacagcaacacatcttg
gctcgttaccttgtcaaacaacattatctacctgtttacgatgctatttataatgattat
ttttttgatgtgttccaactatatcagcactttttatcccacttacaacccgctgcaatt
actccatctatttggcaagaaatgattgttgaaattagtgccaatctcgagcgtcattat
ttacaattagatgatgcaaccgcaatattatatttgcagcaattggttacgggcagtggt
caaaaccagcgcattaaatatttatttattgatgaaatgcaagactattctgctttgcag
ttagcctatattcaaaattcatttcctaatgctaaattgaccctactaggtgatattgag
caaaacgtttatgcgcatgatactctgtcacaacagcgtttttataatttaaccaaatta
attccccataaaaaatctactctaattacactcaatcaaagttatcgggcaacagccgca
attaccaatttagctaaacaatttattccatcaggtgccaaaatccaagcttttaatcgt
tcaggaaaaactcccattttattttcaggcgatgaacaaaaactgcctaatttcacttta
aagttagctcaacaacaagttcaaaaccagcgtcgtgttgctattattactaaaactaat
caacaagcacaacatttagccgaattttggggtaatcatgcacagttattacaggaacaa
catactaaaattccacaaggaatcgttgttttgccagtttatttagctaagggcttagaa
tttgatagtgtgattggctatgatgtttcgaccttcaactatcattcagatggtgactgt
ggcattctttatacgattgccactcgggctttacatgagttgttttttgtctgcggacct
caaagggcagctattttcaatcaagtaaaacctcacagtcttatcttcaaaaaattttaa
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