Leptolyngbya boryana: LBWT_28890
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Entry
LBWT_28890 CDS
T04848
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
lbo
Leptolyngbya boryana
Pathway
lbo03410
Base excision repair
lbo03430
Mismatch repair
lbo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LBWT_28890
03430 Mismatch repair
LBWT_28890
03440 Homologous recombination
LBWT_28890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbo03400
]
LBWT_28890
DNA repair and recombination proteins [BR:
lbo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
LBWT_28890
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
LBWT_28890
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
LBWT_28890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
BAS56962
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Position
3091209..3093155
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AA seq
648 aa
AA seq
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MSLSRSRIPDQRWYIHPDQSDRALQLALETNRSPLLTQVLLNRGLETFEDIQEFLDPQQE
LPSALEDFPDLAVSLELLINAINDKTRIAICGDYDADGMTSTALLLRALRYLGGRVDYAI
PSRMSEGYGINTRIVEEFYEEGVGLILTVDNGIAAHQPIERARELGLTIIVTDHHDLPPE
LPNANAILNPKLIAEESPYRSMAGVGVAYVLALCLAQSFGQTRELQNSLLELFTLGTIAD
LAPLTGVNRRWVKRGLQLLPKSKMAGIQALIQIAGLSNEKNLKPEAIGFRLGPRINAIGR
IGDPQVVIELLVTDDDGVALEQAMKCEIENKRRQQLCEQIEKEAIEYYEDSSFDAKADRV
LLLVKRDWHHGVIGIVASRLVERYGVPVFIGTYEDDDHIRGSARSIPEFNVFEALEFCKD
LMLKSGGHKAAGGFSFKADRLDEIRDRLRTFAHQSLKTEHLKPLVTIDVEADLAQIDLAL
HAQLDVLHPCGMENPEPVFWTPNVLVTEQRRIGKGHIKLVLESAGQKVNAIAWRWGEYFP
LPSPLDVAYRVKSNEWNNQVSVQLEILGVRFPGQSSQTEFRFSDRVYHCTMLDQKELRIQ
NAKGDILVIQKGRKIGTLGRIDKTIQEVDVSQAPYYDLVKAAVNALAI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgtctctttcgcgatcgcgtattccagatcaacgttggtatattcatcccgatcaaagc
gatcgagcgcttcagcttgccttagagacaaatcgctctccactgttaacgcaagttctg
ctcaatcgcggattagaaactttcgaggacattcaagaatttctcgatccacagcaagag
ttgccgtctgcactggaagattttccggatttagccgtaagtttggaactcttgatcaat
gcgattaatgacaaaactcggattgctatctgtggagactatgatgcggatggaatgacg
agtacagcattgttactcagagccttgcgatacttaggtgggcgagtagattatgcgatc
cccagtcggatgagtgaaggctacgggattaacactcgaattgtagaagagttctacgaa
gaaggcgtagggctgattctcacagtcgataatggaattgctgcccatcagccgatcgag
cgcgctagagagctaggtttaacgatcattgtgacggatcaccatgatctacccccagag
cttccaaatgcaaatgcaattctcaatccgaagctaattgcagaagagtcgccgtatcga
agtatggcaggggtaggagtagcttatgtgttggcgctctgtttagctcaaagttttgga
cagacgagagaattgcagaactctttgctagagctatttacattaggcacgatcgcggat
ttagcacctttaaccggggtgaatcgccgatgggtaaaacggggcttacagcttttaccg
aagtctaaaatggctggaattcaagctctgattcaaattgctggattgagcaatgagaaa
aacttaaagccagaagcgatcgggttccggttaggaccgagaattaatgcgatcgggaga
attggcgatccgcaagttgtgattgagctacttgttactgatgatgacggcgttgcttta
gaacaagcaatgaagtgcgaaatcgagaataagcggcggcagcaactctgcgaacagatt
gaaaaagaagcgatcgagtattacgaagatagttcatttgatgcaaaagccgatcgagta
ttactgctagtaaagcgagattggcatcatggtgtaattgggattgttgcatctcgatta
gttgagcgctatggagttcccgtgtttattggaacttacgaagatgacgatcatattcgc
ggttcggctcggagtattccagaattcaatgtgtttgaggcattagaattttgcaaggat
ctgatgctgaaatcagggggacataaagcagcaggtgggttctcgtttaaggcagatcgt
ttagatgaaattcgcgatcgcttgagaacattcgcacatcaatctctcaaaactgagcat
cttaagcctttagtgacgatcgatgttgaagcagatctagctcaaattgatctggcactt
catgcacagcttgatgttttacatccatgcgggatggagaatcctgagcctgtattttgg
acaccgaatgttttagtcaccgagcagcggcgcattggcaagggacatatcaaactagtc
ttagaatctgcggggcaaaaagtcaatgcgatcgcgtggcgttggggtgagtattttccg
ttaccaagccccttagatgttgcatatcgagtcaagtcgaatgagtggaataatcaggtt
tctgtccagcttgaaattctcggtgtgagattcccaggacagagttctcagacagaattt
cgatttagcgatcgagtctatcactgcacaatgctcgatcagaaagaattaagaattcaa
aatgcgaagggcgatattttagtgatccaaaaaggacggaaaattggaacacttggaaga
atcgataaaacaatacaagaagtcgatgtttcacaagcaccgtattatgatttggtgaaa
gctgcggtgaatgctttggcgatttag
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