Lonsdalea britannica: CKQ53_04610
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Entry
CKQ53_04610 CDS
T05623
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lbq03021
]
CKQ53_04610 (rpoH)
Transcription machinery [BR:
lbq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CKQ53_04610 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
UCR_14kD
HTH_10
HTH_3
SANT_DAMP1_like
Motif
Other DBs
NCBI-ProteinID:
AXW86333
UniProt:
A0A1X3RUL4
LinkDB
All DBs
Position
complement(976095..976952)
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AA seq
285 aa
AA seq
DB search
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHFEGDLDAAKQLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPDVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVLEMESRMAAQDM
TFDPAPEDDAQPGHGMAPMLYLQDKTSDFADGIEEDNWESHAADKLAHAMEGLDERSQHI
IRARWLDDDNKSTLQELADRYGVSAERVRQLEKNAMKKLRTAIEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagaacgggcactggctgaacgg
ctgcattttgagggcgacctggatgcggctaagcagctgatcctgtcacacctgcgcttt
gtcgttcacgtagcccgcaactattccggctatggtctgccgcaagcggatttgatccag
gaaggcaatatcggcctgatgaaagccgtgcgtcggttcaaccctgatgtcggcgtgcga
ctggtgtcttttgccgtccactggatcaaggcggaaatccacgaatacgtgctgcgcaac
tggcgcatcgtcaaggtcgctacgaccaaggctcagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtttgggctggttcaatcaggatgaagtcgagctggtcgcgcgcgag
ctgggggtgaccagcaaagacgtgctcgagatggaatcccgcatggcggcgcaggacatg
actttcgatccggcgccggaagatgacgcgcagccgggacacggcatggcgcccatgctg
tacctgcaggacaaaacgtccgactttgccgatggcatcgaggaagacaactgggaaagc
catgcggccgataaactggcccatgcgatggaaggtctggacgaacgtagccagcatatt
atccgcgcccgttggctggacgacgataataagtccaccctgcaggaactggccgatcgc
tatggcgtatccgccgagcgtgtacgtcagttggaaaagaacgccatgaaaaaactgcgc
acggcgatagaagcctaa
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