KEGG   Lonsdalea britannica: CKQ53_04610
Entry
CKQ53_04610       CDS       T05623                                 
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
  KO
K03089  RNA polymerase sigma-32 factor
Organism
lbq  Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:lbq00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbq03021]
    CKQ53_04610 (rpoH)
Transcription machinery [BR:lbq03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CKQ53_04610 (rpoH)
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4 Sigma70_r1_2 KORA UCR_14kD HTH_10 HTH_3 SANT_DAMP1_like
Other DBs
NCBI-ProteinID: AXW86333
UniProt: A0A1X3RUL4
LinkDB
Position
complement(976095..976952)
AA seq 285 aa
MTKDMQTFTLVPQGSLEGYIRAANAYPMLTAEEERALAERLHFEGDLDAAKQLILSHLRF
VVHVARNYSGYGLPQADLIQEGNIGLMKAVRRFNPDVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVELVARELGVTSKDVLEMESRMAAQDM
TFDPAPEDDAQPGHGMAPMLYLQDKTSDFADGIEEDNWESHAADKLAHAMEGLDERSQHI
IRARWLDDDNKSTLQELADRYGVSAERVRQLEKNAMKKLRTAIEA
NT seq 858 nt   +upstreamnt  +downstreamnt
atgaccaaagatatgcaaactttcaccttagttccccagggcagtctggaagggtatatt
cgtgccgccaatgcctatccgatgctgacggcggaggaagaacgggcactggctgaacgg
ctgcattttgagggcgacctggatgcggctaagcagctgatcctgtcacacctgcgcttt
gtcgttcacgtagcccgcaactattccggctatggtctgccgcaagcggatttgatccag
gaaggcaatatcggcctgatgaaagccgtgcgtcggttcaaccctgatgtcggcgtgcga
ctggtgtcttttgccgtccactggatcaaggcggaaatccacgaatacgtgctgcgcaac
tggcgcatcgtcaaggtcgctacgaccaaggctcagcgtaagctgttctttaacctgcgt
aaaaccaagcagcgtttgggctggttcaatcaggatgaagtcgagctggtcgcgcgcgag
ctgggggtgaccagcaaagacgtgctcgagatggaatcccgcatggcggcgcaggacatg
actttcgatccggcgccggaagatgacgcgcagccgggacacggcatggcgcccatgctg
tacctgcaggacaaaacgtccgactttgccgatggcatcgaggaagacaactgggaaagc
catgcggccgataaactggcccatgcgatggaaggtctggacgaacgtagccagcatatt
atccgcgcccgttggctggacgacgataataagtccaccctgcaggaactggccgatcgc
tatggcgtatccgccgagcgtgtacgtcagttggaaaagaacgccatgaaaaaactgcgc
acggcgatagaagcctaa

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