Lonsdalea britannica: CKQ53_12355
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Entry
CKQ53_12355 CDS
T05623
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
lbq
Lonsdalea britannica
Brite
KEGG Orthology (KO) [BR:
lbq00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lbq01002
]
CKQ53_12355
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lbq01011
]
CKQ53_12355
Peptidases and inhibitors [BR:
lbq01002
]
Cysteine peptidases
Family C82
CKQ53_12355
Peptidoglycan biosynthesis and degradation proteins [BR:
lbq01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CKQ53_12355
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AXW87683
UniProt:
A0A1X3S3W4
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All DBs
Position
2711673..2713391
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AA seq
572 aa
AA seq
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MLLAKRKTQGLRLGMTGGALWLGGLLAFSAQAATQTMLSGTTTPISTAAPATAGLRGQLP
AGMTLHYDSALRGLYAQMAEQPMWSDSRAVSAFQQQLAELALAGIQPQFTTWVSWLTDPK
LTGLARDRVLSDAMLGYLQFVSGVEKNGSNWLYANVPYTLSLPPSGLIAEWQNAVKEGRS
AEFVASLAPRHSQYAKMHEALKASLLDNRPWPKLQLAGTLRPGDQSSELTVLQEILQRTG
MLASNTTTLPLFNESSSTDGSVNVTPSGAENVYTGELVDAVKRFQHWHGLQDDGAIGKRT
KDWLNVSSQMRATLLALNIQRLRLIPDNVSTGILVNIPNFSLTYYQNGAEILSSRVIVGQ
PKRKTPMMSSALVNVVVNPPWNVPTTLIRQDIIPKVIMDPGYLQRHGYTLLSDWSENAQP
IDPSMIDWSQVSAERFPYRLRQAPGSTNSLGRYKFNMPNSEAIYLHDTPNHNLFHKDIRA
LSSGCVRVNKAAELAGLLLQDAGWNSARVSSTLEEGNTTYVTMRKRIPVSFYYLTAWVAE
DGKAQYRTDIYNYDGRSKTGESTLSKVGLLLQ
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgttgttagcaaaaagaaaaacgcaagggctgcgactgggcatgacgggaggcgcactc
tggctgggcggcctgcttgcgttttcagctcaggcggccacgcaaaccatgctgtcaggg
acgacgacgccaatatccaccgctgcacctgccaccgccggtctgcggggacagttgcca
gcaggcatgacgctacattatgactctgcgcttcgcgggctgtatgcgcaaatggctgag
cagccgatgtggtcagatagtcgggcagtcagtgctttccagcaacaattagccgagctt
gcgctagctggcattcagccacagttcaccacctgggtttcttggttgaccgatcctaaa
ctgaccgggttggcgcgggatcgtgtgctttccgatgcgatgctgggctatctgcagttt
gtctccggcgtagaaaaaaacggaagcaactggttatacgccaatgtgccctatacgtta
tctttgcctccgtcagggctgattgcggagtggcaaaatgcggttaaagaaggtcgcagc
gccgagtttgtggcctctttggcgccaaggcactcccaatatgcgaagatgcatgaagcg
ttgaaggcgagcctgctggataatcgcccatggccgaaattgcagcttgcgggaaccttg
cgtccgggcgatcaaagcagcgagttgaccgttctgcaggaaattttgcaacgcaccggg
atgttggcgtcgaatacgaccacgctgccgctgttcaatgaatcttcttcgaccgacggc
agtgtgaacgtcacgccatcaggagcagagaatgtttacacgggcgaattggtggatgcg
gttaagcgcttccagcattggcacggtttgcaggatgatggcgcgattgggaaacgaact
aaagactggctgaatgtgtcctcgcagatgcgagcaacgttgctggcgctaaacattcag
cggctgcgtttaattcccgacaatgtatcaaccggtatcctggtcaatattcctaacttt
tcactgacctactatcaaaatggtgcggaaattttatcctctcgcgtcattgtcggacag
ccaaaacgcaaaaccccgatgatgagcagcgccttggtcaacgtggtggtaaatccccct
tggaacgtaccaacgacgctgatccgtcaggacatcatccctaaagtgattatggatccg
gggtatttgcagcgtcatgggtatacgctgttgtctgattggagtgagaatgctcagcca
atcgatccttccatgatcgattggtctcaggtttcggctgagcgattcccctatcgtctg
cgtcaggctccgggaagcactaactcgttggggcgctacaaattcaatatgccgaattcc
gaggccatctatcttcacgatacgccgaaccataatctgttccataaagatattcgggca
ctgagctcgggttgcgtgcgagtcaataaggccgctgagctggcgggcttgctgttgcaa
gatgcgggctggaacagcgcgcgggtttcttccacgttggaagagggcaatacgacttat
gtcaccatgcgcaaacgtattccggtgagcttctattacctgacggcttgggtcgcagag
gatggtaaagcgcaatatcgtacagatatttacaattatgatggccggtcaaaaaccggt
gaaagcacactgtctaaagtcgggttattactgcagtaa
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