Lachnospiraceae bacterium oral taxon 500: C3V36_04955
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Entry
C3V36_04955 CDS
T05749
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lbw
Lachnospiraceae bacterium oral taxon 500
Brite
KEGG Orthology (KO) [BR:
lbw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbw03032
]
C3V36_04955 (gyrB)
03400 DNA repair and recombination proteins [BR:
lbw03400
]
C3V36_04955 (gyrB)
Enzymes [BR:
lbw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
C3V36_04955 (gyrB)
DNA replication proteins [BR:
lbw03032
]
Prokaryotic type
DNA Topoisomerases
C3V36_04955 (gyrB)
DNA repair and recombination proteins [BR:
lbw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C3V36_04955 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
SMC_hinge
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AVM68652
UniProt:
A0A2R3MYE7
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All DBs
Position
1065624..1067540
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AA seq
638 aa
AA seq
DB search
MDQEKDHLEYSEKQIQILEGLEAVRKRPGMYIGSTSARGLHHLVYEIVDNAVDEALAGRC
SHILTQILPDNSIQVRDDGYGIPTGIHEQKGISAVEVVFTILHAGGKFGGGGYKVSGGLH
GVGASVVNALSEWLEVTVYQDGKVYFQRYERGIPQAPLTVIGETTERGTLVHFKPDPLIF
EELVFEYDTLRNRLQEMAFLTKGLSITIEDLRPEHEKTENFQYKGGIKEFVAYRNRNKEK
QYEEIFYCEDVRDNVSVEIAFQHNDTYVENIFTFVNNITTPEGGTHLSGFRSALTKTMND
YARKNKLLKDNEENLTGEDLREGMTAVISVKLENPQFEGQTKQKLGNSEARTAVESVAGE
YLTYFLEENPRVAKIIINKSVQAARAREAARKARDLARRKTAMESNSLPGKLADCSEKDP
SLSEIFIVEGDSAGGSAKSARDRKTQAILPLRGKILNVEKARLDKILGNNEIKAMITAFG
AGISQDFDREKLRYHKIIIMTDADVDGAHIRTLLLTFFYRYMPELIENGNVYIAQPPLYR
VTKNKKSEYVYDDKALEKHLAIIGREGIELQRYKGLGEMDTDQLWETTMNPEKRILLKVE
LEDAAGADEIFTTLMGDKVEPRREFIEAHAKHVTNLDI
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggaaaaggatcatttggaatattcagaaaaacagatacagattttggagggc
ttggaagcggtgcgcaagcgccccggtatgtatatcggcagtacttccgccagggggctc
catcatttggtgtatgagattgtcgataatgccgttgatgaggcgctggccggcaggtgc
agtcatattttaacccagattttgccggataattcgattcaggtcagggatgacggctac
gggattccgaccggtattcatgagcaaaaggggatatcggcggtagaagtggttttcacc
attttgcacgccggcggcaagttcggcggcggcggatataaggtatcgggcggactgcac
ggcgtgggcgcctccgtcgtcaatgctttgtcggaatggctggaagtgacggtttatcag
gacggcaaggtttattttcagcgctatgagcggggcattccgcaagcccctttaacagtg
attggcgaaacgacggaacgaggaactttggttcactttaagcccgatcctttgattttt
gaagagttggtatttgaatacgataccctcaggaatcgcttacaggaaatggccttttta
accaagggtctgtcgattaccattgaagatttgcggccggagcatgaaaaaacggagaac
tttcagtataagggcggtatcaaggaatttgttgcttaccgcaaccgcaataaagaaaag
cagtacgaagaaattttttactgcgaggatgtccgcgacaatgtgtcggtcgagattgct
tttcagcataacgatacctatgtggaaaatatttttacttttgttaataatataacaaca
ccggagggcggcacccatttaagcggtttccgctcggctctgaccaagacgatgaatgat
tatgcccgtaaaaacaagctgctcaaggacaatgaggaaaacctgacgggtgaggattta
cgcgagggtatgacggcggttatcagcgtgaagctggaaaatccgcagtttgaaggccag
accaagcaaaagctgggtaacagtgaagcccggacggcggtggaatcggtggctggcgag
tatttgacttattttttggaagaaaatccgcgtgtggccaaaatcattatcaataaatcg
gttcaggcggccagagccagagaagcggccagaaaggccagagatttagccagaagaaaa
acggcaatggagtccaattccctgcccggcaagttagcggattgctcggaaaaagacccg
tccttatccgagatttttatcgttgagggcgacagtgccggcggttcggccaaatcggcc
agagaccggaaaacgcaggcaattctgcctctgcgcggcaagattttaaatgtggaaaaa
gcaagacttgataaaatcttgggcaataatgaaatcaaggcaatgattaccgcttttggc
gcaggtatcagtcaggattttgaccgggaaaagctgcgctatcataaaattatcattatg
accgatgccgatgttgacggtgcgcatatccggactttgctgctgactttcttttaccgc
tatatgccggagctgattgaaaacggcaatgtctatattgcgcagccgccgctgtaccgg
gtaacgaaaaataagaaatcggaatatgtttatgacgataaggccctggagaagcatttg
gcgatcatcggccgggaaggaatcgaacttcagcgctacaaaggtttaggtgaaatggat
accgaccagctgtgggaaacgacgatgaatccggaaaagcggattttgctcaaggttgag
ttagaggatgcggccggagccgatgagatttttacgaccttaatgggcgataaggtcgag
ccgcggcgtgagtttatcgaggcgcatgccaagcatgtgacgaatttggatatttag
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