Leadbetterella byssophila: Lbys_3366
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Entry
Lbys_3366 CDS
T01350
Name
(GenBank) RNA-binding S4 domain protein
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
lby
Leadbetterella byssophila
Brite
KEGG Orthology (KO) [BR:
lby00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lby03009
]
Lbys_3366
Enzymes [BR:
lby01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Lbys_3366
Ribosome biogenesis [BR:
lby03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Lbys_3366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADQ19017
UniProt:
E4RXA2
LinkDB
All DBs
Position
complement(3774346..3775848)
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AA seq
500 aa
AA seq
DB search
MKRKEEDANSKRAPRPRKKVEETPRAFEGGRKNSFEKRVQDNRSEGFKKPFRKDGENSRF
DRTGDKPRFDRRSDSGRADRPGSGRFDKPAFNRNSKSGERRFDKPRFDRNAELGERRFDK
PRFDRNAESGERRFDKPRFDRNAESGERRFDKPRFGRNAESGERRFDKPRFDRNAESGER
RFDKPRFDRNTESGERSFGKTSGRDNAFQEEGSSNKRQFGRKKGEPFEYGKNLKPQKRPD
YSEENLIKNLPEKQKKKVAEKVVPSDLIRLNRYIANSGICSRREADDLIESGQITVNGKT
ITEMGYQVKKTDVVKYGRKILNPEKLVYVLLNKPKDFITTTEDPEGRRTVMELVAKAGPE
RIYPVGRLDRATTGLLLFTNDGELAEKLSHPSNEIRKIYQVEIDKPLAKEDFEKLIEGVE
LEDGFIKPDQVSIVTPDQQVIGIEIHSGKNRVVRRIFEHLGYEVTQLDRTTYAGLTKKDL
PRGNWRFLTEKEVIRLKYMI
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaaaagaagaagacgcaaattccaagcgcgcaccgcgcccacgtaaaaaagtg
gaggaaactccaagagccttcgaaggaggcaggaaaaattcctttgagaagagggtccaa
gataatagatcagaaggctttaaaaagccgttccggaaagacggagaaaattctagattt
gatagaaccggcgataaaccgagatttgatagaagatcagattccggacgtgccgataga
ccaggttccggccgttttgataaacccgcatttaatagaaattcgaagtcaggagaaaga
cgctttgataaacctagatttgacagaaatgctgaattaggtgaaagacgcttcgataaa
cctagatttgacagaaatgccgaatctggagaaagacgctttgataagcctagatttgat
agaaatgccgaatcaggtgaaagacgcttcgataagcctagattcggcagaaatgccgaa
tcaggtgaaagacgctttgataagcctagatttgacagaaatgccgaatcaggtgaaaga
cgcttcgataagcctagatttgacagaaataccgaatcaggtgaaagaagttttggtaaa
acgtctggaagagataatgcattccaagaagaaggttctagcaataaaagacagtttgga
aggaagaaaggggagccatttgagtatggtaaaaaccttaaacctcagaagagacctgat
tattccgaagaaaatttaatcaaaaaccttccggagaaacagaaaaagaaagttgctgag
aaagtagttccttctgaccttattcgtttaaatagatatatagcgaattcaggtatctgt
tcacgtagggaagctgatgatctgattgaaagtggtcaaattacggtcaatgggaaaacc
attactgagatgggatatcaggtaaagaaaactgacgtagtaaaatacggcaggaagatt
cttaatcctgaaaagctagtttatgttctattaaacaaaccaaaagacttcatcaccact
acagaagatcctgaaggaagaagaacggtgatggaattagttgctaaagccggcccggaa
agaatctaccctgtgggaagactagaccgtgctactacgggccttctcttgttcacgaac
gatggagaattagccgagaaattatcacatccttcaaacgaaatcagaaagatttaccag
gttgagatagataagccattggcaaaagaagatttcgaaaaattaattgaaggagtagaa
ttagaagatggctttatcaaaccggatcaagtttccattgttactccagatcaacaggta
atcggcatagagatccatagtggtaaaaacagggtagttagaaggatcttcgaacattta
ggatacgaagtaactcaactggaccgtactacctatgcaggattaaccaaaaaagacctt
ccgagaggaaattggcgttttttaactgaaaaagaagtgattagattgaaatatatgatc
taa
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