Lacticaseibacillus paracasei ATCC 334: LSEI_0684
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Entry
LSEI_0684 CDS
T00407
Name
(GenBank) DNA repair ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
lca
Lacticaseibacillus paracasei ATCC 334
Brite
KEGG Orthology (KO) [BR:
lca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lca03400
]
LSEI_0684
DNA repair and recombination proteins [BR:
lca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LSEI_0684
Archaeal homologous recombinant proteins
LSEI_0684
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
SbcC_Walker_B
AAA_29
AAA_21
nSTAND3
NID
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ABJ69524
UniProt:
Q03B98
LinkDB
All DBs
Position
685269..688394
Genome browser
AA seq
1041 aa
AA seq
DB search
MQLKQLHMQFFGPYADAVVDFDDFRTSPLFLISGPTGSGKTTIFDALIYALYGETSGERD
GGQMRSNFAGNSDLTKVTLTFDHDGKHYLIERQPPQLQSKKRGDGLTEVKAKVLLAISSD
EKQVAEYRKKNQVQEQLDAVLHLDASQFRQIVLLPQGDFRRFLDADSNAKEDLLRDLFGT
QLIQRWQTAMLAQMKAKGAAIQDQERMLDVLMSQFDFETAPDEHATMADKLSLMRATVAS
QAKVVTARQATAAQSHQRYQEAQTALQQGQQLAQAFTEREQAATALAKLAEQKQTHQKQL
KQIEQLTWVQQHENAAQRVQKAGQDLKAAIVQSEQTQAALTTTEQKFSLDKQALARLQAK
SDQIEAQKKQLNSLQAVQQQLTAIAEQNKQVIKQAAIVNEAELALTHAQQQLTDAQTVKT
QQQTSLDNLGLDELITTVNTQRNLLAALVPQAANYQEAQADVAQLSMAIKKTQVTLEQAE
TQVAVTTSHLNKLQQTQIRQQIAHLAAKLEPDSPCPVCGSTSHPHPALVVDEPLVSEAAL
KQADQERQKAAARKTMVETQLANLETQLKTAKAKTAQARQAFTGHWQEQAKLIAGVADKT
GILQQLTALKTLAATNEHQLTEAQTEHAALQVALKKSDKAITTGTTKVQQCEASLNTARI
DAAEAQSALKTMQKNLPAEATDLASVAAQVTTLQTTITTYQDQLQEAQARVNALDRQLAG
LQADEKHAAAQVTALTKEQAEAKATFTIAVTQYFGADGKQRFAELQLRVSQLPLLNEQVQ
TYEHTQLKQQTLLDAANKTIGTQAQPQLDQLEAEATAAETTATNDQTALIKISQAHDAAE
KLVKQAATIFTANQTALAAYADLQTLATVMNGNGPKKLSLERYVLQAYLQEILNVANSRL
QVLSNNRYQFVLHTSLGTQKIHSGLEIDVYDDQVGEKRAVQTLSGGESFIAALSLALALG
EVIQQESGGINIDALFVDEGFGSLDANSLDVAMNALESLEGESRLIGIISHVTELRDNIP
DQLQVEPAGTGRSHLKIVHSA
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttaaacaattacacatgcaattttttggtccgtatgcagatgcagtcgttgat
tttgacgattttcgcaccagtcccttattcttgatcagcgggccgaccggcagtggtaaa
accacgatttttgatgctttgatttatgccttgtatggtgaaacgtcaggtgagcgtgac
ggtgggcaaatgcgctcaaattttgcaggtaacagcgatttaacaaaggtgacactcacc
tttgatcatgatggcaaacattatttaatcgagcgccaaccgccgcaattgcaaagtaaa
aaacgcggcgatggactaaccgaagtcaaagctaaggtgttgctagctatctcctcagat
gaaaaacaggtggctgagtaccgtaagaaaaatcaagttcaggaacagctagacgccgtt
ttacaccttgatgcttcgcagtttcgacagattgttttgttgccacaaggcgattttcgc
cggttcttagatgctgatagcaatgcgaaagaagatctactgcgtgacttgttcggtact
cagttgattcaacgttggcaaaccgctatgttggcgcagatgaaggccaagggagcagcc
attcaggaccaagagcggatgttagacgttttgatgtcgcagtttgacttcgagacggct
cctgacgagcatgctacgatggcggataagctgtcattgatgagagcaacggtggcgagt
caagcgaaagttgtgacagcaagacaagcgaccgcggcgcaaagtcaccaacgatatcag
gaagcacaaacggcactgcaacaggggcaacaattggcgcaggcttttacagagcgagaa
caagccgccacagctttagcaaaactggcggagcaaaaacaaacccatcagaagcaatta
aaacaaattgaacaattgacatgggtacagcaacatgaaaatgctgcccaacgcgttcaa
aaggctggacaagatcttaaagcggcaattgtgcagtctgaacaaacgcaagcagcttta
acgacgaccgaacagaaattttctctggacaagcaagctttagcacgcttgcaggccaaa
tcagaccagattgaggcccaaaagaaacaactgaatagtttacaggctgttcagcaacag
ttgacagccatcgccgaacaaaataaacaggtgattaaacaagcagcgattgttaatgag
gctgagcttgcgttgacgcacgcacaacagcagttgacagacgcccaaactgttaaaaca
cagcagcaaacaagtctggataacttgggcttggatgagctgataaccacggtcaatact
cagcgcaacttattggctgccttagtgccacaggctgctaattatcaggaagcccaagct
gatgttgcgcagttgtctatggccatcaaaaaaacccaagttacgctggagcaagccgaa
acgcaggtagcagtcacaacctcgcatttgaacaagcttcagcagactcagattcgccaa
caaattgcacatttggctgctaagctcgagcctgacagcccatgtcctgtttgcggcagt
actagccatccgcatccggcgcttgtggttgacgaaccattggtgagcgaagcagcgttg
aaacaagccgatcaggaacggcaaaaggctgccgcaagaaaaactatggtcgagacacaa
ttggcgaatcttgaaacccaactgaaaactgcgaaggccaaaaccgcacaggcaaggcag
gcttttactgggcattggcaagaacaggccaaactgattgcaggcgttgcggataaaact
ggtattttacaacaattaacggcgttgaaaacactggcggcaactaacgagcaccagtta
acggaagcgcaaacggagcacgctgctttgcaagttgcgctaaaaaagagtgacaaggcc
atcactaccggtacgacaaaagttcagcaatgcgaagctagtttgaatacggctagaatt
gatgcggctgaagcgcaaagtgcgttgaagaccatgcaaaagaacctgcccgcggaagcg
actgatttggcgtcggtcgctgctcaagttacaaccctgcagacaaccattacaacgtat
caggatcaacttcaggaggcgcaggcaagggtcaatgctttggaccggcaattagccggg
ttgcaagcagacgagaaacacgccgcggcacaagtgactgctttgaccaaggaacaggcg
gaagcaaaagcaacctttacgatagcagtcacgcagtattttggtgctgatggcaagcaa
cggttcgccgagttgcagctgcgggtatcacaattaccgctattgaacgaacaggttcag
acttatgagcatacacagctcaagcaacaaacgttattagatgccgccaataaaactatt
ggtacccaagcacagccacagcttgatcagctcgaggccgaagcaacagcagcggaaacg
acagcaacaaacgaccaaacggctttgattaagattagtcaggcgcatgatgctgctgaa
aaattggtcaaacaagccgccactatctttacggccaatcaaacggcgcttgcagcctat
gcggatttacaaacactggccactgtgatgaatggcaatggtcccaagaaactcagtctg
gagcgatacgttttgcaggcttatttgcaagaaattctgaatgtggccaatagccgtctg
caggttttgtccaataaccggtatcaatttgttttgcatactagtttgggaacgcagaaa
attcattctggcttggagattgatgtttacgatgatcaggtaggagaaaagcgtgccgtg
cagacgctatcgggcggcgaaagcttcatcgctgcgctcagtctggcattggcgttaggc
gaagtgattcagcaggaaagcggcggcattaacattgatgcgttgtttgttgatgaaggc
ttcggcagccttgatgccaatagtcttgatgtggcgatgaatgcgttggagtcgctagaa
ggtgaatcgcggctgattggcatcatctcccatgtgaccgagttgcgggataatattcct
gaccagttgcaagttgagccagcaggtacgggccgcagccacttgaagatcgtccactcg
gcttag
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