Legionella clemsonensis: clem_01980
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Entry
clem_01980 CDS
T05016
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcd
Legionella clemsonensis
Brite
KEGG Orthology (KO) [BR:
lcd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcd03032
]
clem_01980 (topA)
03400 DNA repair and recombination proteins [BR:
lcd03400
]
clem_01980 (topA)
Enzymes [BR:
lcd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
clem_01980 (topA)
DNA replication proteins [BR:
lcd03032
]
Prokaryotic type
DNA Topoisomerases
clem_01980 (topA)
DNA repair and recombination proteins [BR:
lcd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
clem_01980 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
zf-C4_Topoisom
Toprim
Sds3
Motif
Other DBs
NCBI-ProteinID:
ASQ44959
UniProt:
A0A222NZG9
LinkDB
All DBs
Position
complement(457530..459809)
Genome browser
AA seq
759 aa
AA seq
DB search
MSRHLVIVESPAKAKTIQKYLGKDYDVLASYGHVRDLAPRKGSVNPDNHFAMNYKPIEKN
LRHIESIAKALKHSDSLLLATDPDREGEAISWHVYELMKERNLLDNKEVHRIFFNEITKS
AIQEAISNPRSISMDLVNAQQARRALDYLVGFNLSPLLWKKIRRGLSAGRVQSPALRLIV
EREEEIERFVPQEYWRIIALCEHENNAFEARLTHFAKEKLQQFTINETTQAHQIRDSLLQ
QAQGTLLVDNIEKKQRKRKPASPFITSTLQQEAARKLGFTARKTMMIAQQLYEGIDIGTG
TTGLITYMRTDSVNLAKEAIDEIRNFIDERYGKDNCPESPRLYKTKSKNAQEAHEAIRPT
SIRRTPEMVQQALTTDQLKLYSLIWKRTIACQMTDAVIDTVAVDLSCGQGNMFRATGSTI
IFPGFLSVYEEGRDDIQDDEQNALLPSLKVGEKVNLHDILANQHFTEPPPRYSEASLVKA
LEEYDIGRPSTYATIIHTLQQREYVIVDKKRFVPTDVGRIVNRFLTGHFTRYVDYKFTAE
LEDTLDAISRGEREWIPVLEEFWKPFINQIENTDTQVQRKDITTETLEETCPKCGKPLAI
RLGKRGRFIGCTGYPDCDYTQDLNTQESEKPEAEVIEGRVCPECAGSLHIKTGRYGRFIG
CSNYPQCKYIEPLEKPADTGVECPKCHSATILKRKSRKGKIFYSCGAYPKCDYALWNEPI
DKSCPKCAWPLLTVKETKRSGRQIICPHEGCGYTASEEK
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgagcagacacttggttatcgtggaatcgcccgcgaaagctaaaacaatccaaaaatat
ttagggaaagattatgatgttttggcctcttatgggcatgtgagagatttggctcctcgc
aagggttcggtaaatcctgacaaccattttgccatgaactacaagcccattgaaaaaaat
ttgcgccacattgaatcgattgccaaagcgttaaagcattccgattcgctcttactcgcc
actgaccctgatcgcgaaggtgaagccatttcctggcatgtgtatgaattaatgaaagaa
cgcaatttactagataacaaagaagttcatcgtattttctttaacgaaattacaaagtcg
gccatccaggaagctatcagtaatccacgctctatttccatggatttggtcaatgcgcaa
caagcacgccgcgcacttgattatctggtaggctttaacttatctcccttattgtggaag
aaaattcgccgtggcttatctgcaggacgtgtacaaagtccagctttaagacttattgtc
gagcgagaagaagaaattgagcgatttgtacctcaagaatattggcgcattattgcctta
tgtgaacatgaaaataatgcatttgaggcgaggcttacccattttgccaaagagaagctg
caacaatttacgattaatgagacaacacaagcccatcaaatcagagatagcctgctccag
caagctcagggtactctgttggttgacaacattgagaagaaacaacgtaagcgtaaaccg
gcctctccctttattacctcgaccttacaacaggaagcagcaagaaaactaggatttacc
gcccgcaagacaatgatgatagcccagcagttatatgaaggaattgatattggtactggt
acaacgggtttaattacctatatgcgtacagattccgtcaatctggcaaaggaagctatt
gatgaaattcgtaatttcattgatgagcgctatggcaaagacaattgtccggagagtccc
cgtctttataaaacaaaatccaaaaatgcgcaggaggctcatgaggccattcgtccgact
tccattaggcgaacccccgaaatggttcaacaggcacttactactgaccagctcaagctc
tatagtttaatttggaaacgtaccattgcctgccaaatgaccgatgctgttattgatact
gtcgctgtggatttaagctgtggtcagggcaacatgttccgtgctacaggctctacaatc
atttttccaggttttttatccgtttatgaagagggacgggatgatattcaagatgatgag
caaaatgccttgctaccttcattaaaagtgggtgaaaaagtcaatttgcacgatattctt
gcgaatcaacatttcactgaaccaccacctcgctattcggaagcatctctagtcaaagcc
ttggaagaatatgatattggtcgcccctcaacttacgcaacaattattcacacactgcaa
cagcgtgaatatgtgattgttgataaaaagcgctttgttcctaccgatgtgggacgcatt
gtcaatcgttttttaaccggtcactttacccgttatgtggattataagtttactgccgaa
ctggaagatactctggatgcgatatcacgcggtgaacgggaatggattcctgtcttggaa
gagttttggaaaccatttatcaaccaaattgaaaacacggacacccaagttcaacgcaaa
gacattaccactgagacacttgaagagacctgtcctaaatgtggaaagcccttagctatt
cgtcttggtaaacgtggtcgttttattggttgcacaggctaccccgattgtgactataca
caagatttaaatacccaagagagcgaaaaacctgaagcagaggtgattgaaggacgcgtt
tgcccagaatgtgcaggctccttgcatattaaaacaggtcgttatggtcgctttattggc
tgcagcaattatccccaatgcaaatacatagagcctcttgaaaagccagccgacacaggg
gtggaatgtcctaagtgccatagtgcgacaattctgaaacgcaaatcacgcaaaggaaaa
atattttattcttgtggtgcttatccaaaatgtgactatgcgctctggaatgagcctatc
gataagtcatgccccaaatgtgcctggcctttactcactgtcaaagaaaccaaacgttcc
ggccgacaaattatttgtccgcatgaagggtgtggttatactgcaagcgaagagaagtaa
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