Lacticaseibacillus paracasei LC2W: LC2W_1543
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Entry
LC2W_1543 CDS
T01956
Name
(GenBank) Hydroxymethylbutenyl pyrophosphate reductase
KO
K02945
small subunit ribosomal protein S1
Organism
lce
Lacticaseibacillus paracasei LC2W
Pathway
lce03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
lce00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
LC2W_1543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
lce03011
]
LC2W_1543
Ribosome [BR:
lce03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
LC2W_1543
Bacteria
LC2W_1543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
Spt6_S1
S1_2
RNase_II_C_S1
CsrA
Motif
Other DBs
NCBI-ProteinID:
AEA53876
UniProt:
K6QFT6
LinkDB
All DBs
Position
1494130..1495449
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AA seq
439 aa
AA seq
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MSDNNVNENTETMADALKSVTTVKIGDTVKADVLAVEDKQLIVGIEGTGVEGVVPIKELS
TQPIDDIHDVAKVGDKLDLVVLSTVGKDKENGQFLLSKRRLEAQKVWKEIQAKYEAGETI
TAPVTSVVKGGLVVNAGVRGFVPASMVEDHFVEDLSQYKGKELEFKIIEIEPSENRLILS
HRAIVEASKAEARKEIFAKIQPGDTVEGKVARLTNFGAFVDLGGVDGLVHVSEISFDHVD
KPSDVLKVGQEIKVKVLNVDPDRNRISLSIKATLPQPWDDIEEKAPAGSVLTGTVKRLTT
FGAFVEVFPGVEGLVHISQISHEHVATPADVLKEGQEVQVKVLSVDPDAHRLALSIKALQ
ERPAGSEEESHEGGNSSRDNSDRGDRRRSSRPRRGNDRHQSTSIPAEYQQDDSGFSLGDI
LGDALKDAAKGNDDQDDNK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagtgataataacgttaatgagaacaccgaaacaatggcggacgcccttaagagtgtc
accacagtaaagattggtgataccgtcaaggcagacgttcttgccgttgaagataaacaa
ttgatcgttgggatcgaaggaacaggcgtcgaaggcgtggtcccgatcaaggagttatca
actcagccaatcgatgacattcacgatgttgcaaaagtcggcgacaagcttgatttagtt
gtgctttcaacggttggcaaagataaagagaatgggcagttcctgctgtccaagcgccgt
ttggaagcgcaaaaggtttggaaagaaatccaagctaagtatgaagcaggtgaaaccatc
accgctccggttaccagcgtcgttaaaggcggactggttgttaatgccggtgttcgtggc
ttcgttcctgcatccatggttgaagatcattttgttgaagatcttagccaatacaagggt
aaggaacttgaattcaagatcattgaaatcgaaccaagtgaaaatcgtctgattctttca
catcgtgcgattgttgaagccagcaaggctgaagcacgcaaggaaatctttgcgaagatt
caacctggcgataccgttgaaggtaaagttgctcgtttgaccaactttggcgcctttgtt
gatcttggcggcgttgatggtttggttcacgtttcagagatttcgtttgatcatgttgac
aagccaagcgatgttctgaaggttggtcaagaaatcaaggttaaggttctgaacgttgat
cctgatcgcaaccgcatttccttgtccatcaaagcaacgttgccacaaccttgggacgac
attgaagaaaaggcaccggccggctctgttttgactggtacagttaaacgtttgaccact
tttggtgcctttgttgaagtcttccctggtgttgaaggtttggttcatatttcccagatc
tctcacgaacacgtagcaaccccagcggatgtccttaaggaaggccaagaagtgcaggtc
aaggttctttccgttgaccctgatgcacatcgtcttgctttgtccatcaaggctttgcag
gaacgtccagcaggttctgaagaagaatctcatgaaggcggcaacagcagtcgtgacaat
agcgaccgtggtgaccgtcgtcgttcttcacgtcctcgtcgtggcaatgatcgtcatcaa
tccacgtcgattcctgctgaatatcagcaagatgattcaggcttctcacttggcgacatc
ttaggcgatgccttgaaagatgctgctaagggcaatgatgatcaggatgataacaagtag
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