Lates calcarifer (barramundi perch): 108874107
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Entry
108874107 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: calmodulin-regulated spectrin-associated protein 1-B-like
KO
K17493
calmodulin-regulated spectrin-associated protein
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108874107
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108874107
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108874107
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
108874107
Intermediate filaments
Intermediate filament-binding proteins
108874107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAMSAP_CKK
CAMSAP_CH
CAMSAP_CC1
CH
Motif
Other DBs
NCBI-GeneID:
108874107
NCBI-ProteinID:
XP_018518027
LinkDB
All DBs
Position
LG9:15062471..15083948
Genome browser
AA seq
1598 aa
AA seq
DB search
MDVEVSAGRDGTWRRADDDDDDAGRGGGGGMEAQVVPLELYDSARAKIDANLRWLFAKAY
GIDNIPADLRDPFYTDQYEQEHIKPPIIRLLLSGELYCRVCGLILHAEQAALLQSHQSVI
QALSRKGIYVLETDNTPVSDLDLSSTPIKMSSHIHLIDALMMAYTVEMINIEKVVSSVKR
FSNFSASKELPFDLEDAMVFWINKVNIKMREITEKELKMKQHLLESSSHQKSPSKWYWKL
VPVRYRRDHLSGRTLQHFPLLEDLLKDVCDGTALLAVIHFYCPELIRLEDICLKEVPSIA
DSVYNIQLLKEFSNEYLNKCFYLKPEDMLYSPPVLKSNVMVFIAELFWWFESVKPDFVQP
RDLQEIRDVRLLLQPKGSRSQVPISNVTKRSFLTTSNSADVLTMPQSPDLSIKPSSSSPS
HSLLPLRQRQQKVLEESTSELRNRSNSVARADGQHQGSALAWPERRPRPLSQPVPYALHF
PMEDDADSISLARSISKDSLASNIMSITPKHMLGSGSHLPQHRLSGQSLLSHMRIEDEEE
EIEEEELVAVIHPYAYSQHRLGSEMEQDELELENAASTLKVANSRRSPRLDTGPFTADRQ
ADSYYLEPLMPAVPKPAKEKSISLNKQEESGESRCRAAGAARKAATNVPSTFQRKAPVAE
SRSTFMPIPVAESVPSSLRPPTEGSIGISPSVNKQSQGFFLHLSGEPDQHSPFPSVLEVG
HDSDSDIADLEEDDEEDDQMELTREVVRRGKGKYLEEGEVCEFIEGEGESAKLREDLKVS
ERDDKEDGSGRSSPPQHHILGEQLQRFSSASASVKMTSFAERKLLKLGLRDGFSSTSSSQ
KTTPDGSEIAPPWQLRSDCTSGWIGKETSSVLGSNIMGNPPVVPSELLQLHMQLEEQRRA
IEYQKKKMETLSARQRLKLGKAAFLNIVKKGGGKSDTLPLPLKHPQESSELTAADWSKVK
AQSCRDDSCLDALKVQAKAGQPEGGQMNRDNRLNTLSQDSGADPGFNECSRSIDLLNEAI
NSIQQQMMQLSLQQDLLMKQNVVSPPEGVESGPSTTPNTTQTTSSTSDSRSYAVHFVDIG
GSNSFPARRPPKLSSSQRNKATDRKQNKENSKLASNKSNTQSPECTPSPSAAGDQETSAV
VESSRLERSIQRNTTFRIHDSTGEGSGRSPDKAQTQDPPVISSTPGSPSQATESEENKAD
NSGKEAAGGDESTRVKGQLIEVDLSELKDPLEDGSADVTDLTAESEQKNVLGFFFKDDEK
AEDEMAKRRAAFLLKQQRKAEEARLRKLQQEAESELKRDEARRKAEEDRVRKEEEKARRE
LIKQEYLRRKQEALMEEQGLVKPRPRTKSRRNRPKSLHREEYNSLSKGSTTRNSLKVSML
IKAQGSAAGCRGADLSCSHRGSTLSLATEADSVISGGAESNRAGSVCSMESFPMLSRASS
RNMERDWENGSIASSITSTEYNGPKLFKEPSSKSNKPIIINAIAHCCLAGKVNEAQKNVV
LEELEKCESNHLIILFRDSGCQFRAIYSYSPDTEEIIKFTGTGPRSIGRKMIDKLYKYSS
DRKQFTVIPAKSVSVSVDALTIHNHLWQVKRPGSARRK
NT seq
4797 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggaggtgagtgctggcagggacggcacctggaggagagcagatgatgatgat
gatgatgcaggacgaggtggaggaggtggcatggaggctcaggttgtaccactggagctc
tacgactctgcaagagccaaaatagacgcaaatctccgctggttgtttgccaaagcctat
ggtatagacaatatccctgcagacctgcgagaccccttctacactgaccagtatgagcag
gaacacatcaagccccccatcatccgcctgctgctgtctggagagctctactgccgggtg
tgtgggctcatcctgcatgctgagcaggctgccttgctccagagccaccagtctgtcatc
caggccctgtccaggaaaggcatctatgtcctggagacggacaatacacctgtttctgat
ctggacctcagctcgactcccataaagatgagctcccacatccacctcattgatgccctg
atgatggcctatacagtggagatgatcaacatagagaaggttgtgtccagtgtcaagcgc
ttttcgaacttcagtgcctccaaggagctgccttttgacctggaagacgcaatggtcttt
tggatcaacaaggtgaacataaagatgagggagatcacggaaaaagagctgaaaatgaag
caacatttgctggagtcatccagtcaccagaagtctccctccaaatggtactggaagctt
gtacctgtgcgttaccgcagagatcacctgtcaggtcggacgcttcagcatttccccctt
ttggaggacttgttgaaggatgtgtgtgatggcacggctcttctggctgtgatccacttc
tactgcccagaactcattagactggaagatatctgtctgaaggaggttccttctatagca
gacagtgtatacaacatccagctactgaaggagttttctaatgagtacctgaacaaatgc
ttctacctgaagcctgaggacatgctgtattctccaccagtgctgaagagtaacgtgatg
gtctttattgctgagcttttctggtggtttgagagtgtgaagccagactttgtacagccc
agggaccttcaggaaatcagagatgtgagattgctgctgcagcctaaaggttctcgatcc
caagttcccatctccaatgtcacaaaacgtagtttcctgacaacatcaaactccgctgat
gtcttgaccatgccccagagccctgacctcagtattaaaccaagctcatcaagcccatct
cactctttactgcccctgagacagagacagcagaaggtccttgaggagagcacttcagag
ctgagaaacaggtccaactctgtggctcgggcagatgggcagcaccagggctcagcactg
gcctggccagagaggaggccgaggcctttatcccagccggtaccctatgccctgcatttt
cccatggaggatgatgcagacagtatcagcctcgctcgctccatcagcaaagacagcttg
gcctccaatatcatgagcattacccctaaacacatgctgggatcaggttcccatctgcct
cagcacagactcagtggtcaaagcctgctgagtcacatgcgcatagaggatgaggaagag
gaaatagaagaggaggagctggttgctgttatccacccttacgcatattctcaacatcga
ctcgggagtgaaatggaacaggatgagctggagctcgagaatgcagcctccaccttaaag
gttgctaattctcgtcggtctcctcgccttgacacgggtccctttacagcagaccgtcag
gctgacagctactatctggagcctttgatgcctgccgtccctaagcccgccaaagagaag
agcatcagcctgaataagcaggaggaaagtggtgagagtcgctgtagagcagcaggagct
gcaaggaaagcagccaccaatgtcccaagcacatttcagaggaaagcccctgtggctgag
tcaagaagtacctttatgcccatacctgttgcagaatcagtgcctagctctctcaggcca
cccacagaggggtcgataggcatctctccatctgtgaataaacagtcccaaggctttttc
cttcatttgtcaggagagccagaccagcacagtcctttcccatctgtgctggaggtaggg
catgactctgactcagacattgcagaccttgaggaagacgatgaggaggacgatcagatg
gagttgactagagaggtggtgagaagaggaaaaggaaaatatttagaggagggggaggtg
tgtgaattcatagagggagagggggagtcagccaagctgagagaagacttgaaggtgagc
gagcgggatgataaggaagatggcagtggacgctcaagccctccccagcaccatatcctg
ggcgagcagctgcagcgcttcagcagtgccagtgccagtgtcaagatgaccagctttgca
gagaggaagctccttaaacttggcctccgcgatggattttcaagtaccagcagctcccag
aagacaacaccagatggctctgagatagcccctccctggcagctgaggagcgactgcacc
tctggttggatagggaaggagaccagttctgtattggggagtaatataatggggaatccc
ccagtagtgccttcggagctgctgcaactacacatgcagctagaagagcaaagacgtgca
atagagtatcaaaagaagaagatggagaccctatcagcgcggcagagactaaagctgggg
aaagctgcgttcttgaacattgtcaagaagggtggagggaagagcgacacgcttcctctg
cctctgaaacacccacaggaatcctcagaactaacagctgctgattggagtaaagtgaag
gctcagtcctgccgggatgactcctgtcttgatgctctgaaggttcaggcgaaggcaggt
caaccggaaggaggacagatgaacagagacaacagactgaacaccctgtctcaggacagt
ggggctgatcctggctttaatgagtgttcccgctccatagatctactcaatgaggctatt
aattccattcagcagcagatgatgcagctctcattacagcaagacctgctgatgaagcag
aatgtggtctcacctccagaaggtgtagagtcaggccctagcacaacccccaacacaaca
caaacaacatcctctacctcagactccaggtcttatgcagtccactttgtagatattggt
ggcagcaattcttttcccgctcgccgccctcccaagcttagctccagccaacgcaacaaa
gccacggacagaaaacagaataaagagaacagcaagttggcctcaaacaagtctaatact
cagtccccagagtgcacaccctctccaagtgctgccggagaccaggagacctcggctgtt
gttgagagctccaggctagagagaagcattcagagaaacaccactttcagaatccatgat
agcaccggcgaaggaagtgggcgctctccagacaaagcccagacacaggacccaccagtc
atctccagtacacccggatctccctcacaggctacagaatcagaagagaacaaggctgac
aactcaggaaaagaggctgcgggtggagatgagagtaccagggtcaaaggtcaactgatt
gaggtcgatctgtcagagcttaaggatccgctggaagatggcagcgcggatgtgacagat
ttaacagcagagagcgagcagaagaacgtgttgggcttcttcttcaaggatgatgagaag
gcggaggatgaaatggcgaaacgtcgcgctgccttcctcctcaaacagcagcgcaaagcc
gaagaggcaagactacgcaaactgcagcaagaggccgagagcgagctcaaacgtgatgag
gccaggcgtaaggcagaagaggaccgcgttcgcaaggaagaggagaaggcacgacgagag
ctgattaagcaggaatacctgcggaggaagcaggaggcgctgatggaggagcagggtctg
gtcaagcctcgcccacggactaaatcccgcaggaacaggccaaaatcactgcaccgtgaa
gagtacaacagcctctccaaaggatccaccacacgtaattctctgaaggtgtccatgttg
atcaaagcccagggctcagcagcaggctgcaggggagctgatctgagctgcagtcaccga
ggatcgacgctgtctttggcgactgaggcagacagtgtcatctctggaggggcagagtca
aacagggctggatctgtgtgctctatggagtcgttccctatgctgagcagggcatccagc
aggaacatggagagagactgggagaacggctccatagcctcttctatcacttcaactgag
tataatggtccaaaactcttcaaagaaccgagctccaagtctaacaagccaatcatcatt
aacgccattgctcactgctgtctggctggaaaggttaacgaggctcagaagaatgttgtt
ctggaggagctggaaaaatgtgagtctaatcacctgatcatcctcttccgcgacagcggg
tgccagttccgcgccatttactcttattccccggacaccgaggagatcatcaagttcaca
ggcactggaccgcgctctatcggccgcaagatgatcgacaagctgtacaaatacagctcg
gaccgcaagcagttcaccgtcatccctgccaagagtgtgtcggtcagcgtggatgccctg
accatccacaatcacctctggcaggtcaagagaccggggagtgcacggaggaagtga
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