Lates calcarifer (barramundi perch): 108875047
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Entry
108875047 CDS
T04895
Symbol
wars1
Name
(RefSeq) tryptophan--tRNA ligase, cytoplasmic
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108875047 (wars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lcf01007
]
108875047 (wars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lcf03016
]
108875047 (wars1)
Enzymes [BR:
lcf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
108875047 (wars1)
Amino acid related enzymes [BR:
lcf01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108875047 (wars1)
Transfer RNA biogenesis [BR:
lcf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
108875047 (wars1)
Prokaryotic type
108875047 (wars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WHEP-TRS
tRNA-synt_1b
Motif
Other DBs
NCBI-GeneID:
108875047
NCBI-ProteinID:
XP_018519212
UniProt:
A0A4W6F325
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All DBs
Position
LG19:13980920..13985069
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AA seq
476 aa
AA seq
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MTDCQGDGEGANSPMGLYEKLTAQGDKVRTLKTAKAEKAEIDAAVQLLLKLKVDYKQMTG
QDYRAGCPPSENSVVPDNGPAADGADDEDTVDPWNVSTTSAKGVDYDKLIVRFGSSKIEK
ELVDRIEKVSGQRAHRFLRRGIFFSHRDMHQVLDAYEKHKSFYLYTGRGPSSEAMHVGHL
IPFIFTKWLQDVFDIPLVIQLTDDEKYLWKDLTLEECHRFAVENAKDIIACGFDVNKTFI
FSDLDYMGASPEFYRNVVKVQKHVTFNQVKGIFGFTDSDCIGKISFPAIQAAPSFSNSFP
QIFGGRKDIQCLIPCAIDQDPYFRMTRDVAPRIGYPKPALLHSTFFPALQGAQTKMSASD
ANSSIFLTDTPKQIKNKINKHAFSGGKDTVEEHRKYGGNADVDVSFMYLTFFLEDDEQLE
KIRQDYTSGALLTGELKKILIETLQPMIAQHQERRKQVTDETVKQFMTPRPLNFNF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgacagactgtcagggagacggagaaggagcgaatagtccaatggggctgtacgagaaa
ctgacagctcaaggagacaaagtcagaaccttgaaaacagctaaagctgagaaagctgaa
attgatgctgctgtgcagttgctgctaaagttgaaagtggactacaaacagatgacaggt
caggattacagagcaggatgtccaccctcagaaaactctgttgtccctgacaatgggcca
gcagctgatggtgccgatgatgaagacacagttgacccatggaacgtttccaccaccagt
gccaagggggtagactacgacaaactcatagtgaggtttggcagcagtaaaattgagaag
gagctggtggacagaatagaaaaagtctcaggacagagggctcaccgctttcttagaaga
ggaatcttcttctcacacagagacatgcatcaagtgctggatgcatacgagaagcacaag
tccttctacctttacactggcagaggtccgtcctctgaagccatgcacgttggtcacctc
atccctttcatcttcaccaagtggcttcaggatgtatttgacatccctttggtgatccag
ctgactgacgatgaaaagtatctgtggaaggatctaacactagaggagtgccaccgcttc
gctgtggaaaacgccaaagacatcatcgcctgtggctttgatgtcaacaagaccttcatc
ttctctgacctcgactacatgggcgcatcccctgaattctacaggaatgtggtaaaggtc
cagaagcatgttacgttcaaccaggtcaaaggcatctttggcttcacagacagtgactgc
attggaaagatcagcttcccagccatccaggcagccccatccttcagtaactctttccca
cagatctttggaggcagaaaggacatacagtgtctcatcccctgcgccatagaccaggac
ccttacttcaggatgacccgcgatgtagctccaaggatcggctatcccaaaccagcgctg
ctgcactccaccttcttccccgccctgcagggggcgcagaccaagatgagcgccagtgat
gccaactcctccatcttcctcacggacacaccaaagcagatcaaaaacaagatcaacaaa
cacgcattttcggggggaaaagacacggtggaagagcacaggaagtacggcggaaacgcc
gacgtagacgtctccttcatgtacctgaccttcttcctggaggatgatgaacagctggag
aagatcagacaggactacacaagtggagctctcctcacaggagaactgaagaagattttg
attgagactctgcagccaatgatcgcccagcatcaagagagacgcaaacaagtcacagat
gagacagtcaagcagttcatgactccaaggcctttgaattttaacttctag
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