Lates calcarifer (barramundi perch): 108875804
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Entry
108875804 CDS
T04895
Name
(RefSeq) speckle targeted PIP5K1A-regulated poly(A) polymerase isoform X1
KO
K18709
speckle targeted PIP5K1A-regulated poly(A) polymerase [EC:
2.7.7.19
2.7.7.52
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lcf03019
]
108875804
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
108875804
2.7.7.52 RNA uridylyltransferase
108875804
Messenger RNA biogenesis [BR:
lcf03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
108875804
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_assoc
RRM_1
RL
zf-met
TUTase
Nup35_RRM_2
zf-C2H2_jaz
RRM_7
RRM_3
zf-C2H2_2
Motif
Other DBs
NCBI-GeneID:
108875804
NCBI-ProteinID:
XP_018520460
UniProt:
A0A4W6DEV7
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Position
LG23:complement(6765486..6771503)
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AA seq
790 aa
AA seq
DB search
MESDGDIKTTPRGFHCTLCNVNLPNKPSLEQHVKGRKHKTLSTVRATRKTQEEHSVFVSG
IKPDISQTDIAEYFQQFGPVTDVIMDKDKGAYAIVQFSETESIDAALACVEHQMKGLKLR
VKPREKKEFKMIPKKKNDSQNLQQVLDRLKPELCQLASVDAQMKYIVERFQLGENEKKGR
SLLVQLLQEVFVEFFPDSQILPFGSSVNTFGIHSCDLDLFLDLENTKVFQARAKSATEQA
GEGTSDDGRSEDSILSDIDLTTASPAEVLDLVATILKRCVPSVHKVHVVSSARLPVVKFH
HRELNLQGDITINNRLAVRNTRFLQLCSGMEDRLRPLVYTIRYWAKQKQLAGNPSGAGPL
LNNYALTLLIIFYLQNCEPSVLPTVDHLKDMACEEEECVIEGWDCTFPSQPIAVPPSKNT
QDLCTLLSGFFSFYAKFDFASSVISVREGRALPITDFLQEEQPSKTPHHSPKLGPLNLLD
PFELSHNVAGNLNERSHRCFQKECQEAQKYCRSLQYQCKSTKGKSWGLVRLFTPHGEVPH
TKTEQLTISIPFKSASLPEELRNQLHMAGDGFRLLWFQKVCAAVEGVLKSVLRCHLAPST
DVVFGEDSAVNAADEMETPSASLNTSADDSINSVDSQNEASPLGTAVVGAKRRLSSGSDA
SVSPQGKKPRMAKRGNFPHWVCVQKHIVWAGRRKVRRELIKDADSRPEGSCMEMESQVTA
HIIEKEPALKEPLKFKVQPQMVGGTESTRAVLKLEPTTDSAGVFHDFFHFLEVFLPKMVE
TLLGKEAGTV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagatggtgacattaaaacgacgccaagggggtttcactgcactctgtgcaat
gtcaatttaccaaacaagccaagtctagagcagcatgttaaaggacggaaacacaagaca
ctgagcactgtgcgagccaccaggaagacccaggaggagcatagtgtgtttgtcagtggc
atcaagcctgacatctctcagactgacattgctgagtacttccagcagtttgggccagtc
acagatgttatcatggataaagacaagggtgcgtatgccatcgtgcaattcagtgagact
gagagtatagacgcagccctggcctgtgttgagcatcagatgaagggcctgaagctgcgt
gtcaaaccccgggaaaagaaggagttcaagatgattcccaagaagaagaatgactcccag
aacctccaacaagttctcgaccgtctcaaacctgagctgtgtcagttggcatcggtggat
gcacagatgaaatacattgtagagcgatttcagttgggagaaaatgaaaagaagggcaga
agcttgctggttcagctcctgcaagaggtttttgtcgagttttttccagacagccagatt
ctgccatttggttcatctgtcaacacttttggtatccactcctgtgacttggacctcttc
ctggacctggaaaacaccaaggtgttccaggcccgcgccaaatctgccacagagcaggca
ggcgagggtacgtcagatgatggccgctctgaggactctatcttgtctgatattgacctg
accacagcctcaccagcagaggtcctggacctcgtggcaacaatcctgaagcgctgtgtc
cccagcgtgcacaaagtccatgtggtcagcagtgcacgtctccccgtggtcaagttccat
caccgtgagctgaacctgcagggggacataacaattaacaacagactagcagtaaggaac
actcgcttcctccagctgtgttcagggatggaggacaggctgagacctttggtgtacacc
atccgctactgggctaagcagaaacaactggctggcaatcccagtggtgccggtcccctt
ctcaacaattatgctctgacactgctgatcatcttctacctgcaaaactgtgagccttct
gtcctccccacagtggaccacctcaaagacatggcctgtgaagaagaagagtgtgtgatt
gagggctgggactgcaccttccccagtcagcccattgcagtaccccccagcaagaataca
caggacctctgcaccctgctgtctggtttcttctccttctatgctaagtttgattttgcc
agtagtgtcatatctgtcagggaggggcgtgcactcccaatcactgatttcctgcaagag
gaacagccctccaagacccctcaccatagtcccaaactgggccccctaaatctcttggac
ccctttgaactctcccacaatgtagccggaaacctgaacgagcgctcgcaccgctgcttc
cagaaggaatgccaggaggctcaaaagtattgccgcagcctgcagtaccagtgtaaatca
accaaggggaagtcgtgggggctggtgcgcttgttcaccccccatggggaagttccacac
accaaaacagaacagctgaccatcagcatcccgtttaaatcggcgtcactccctgaagag
ctgcgtaatcagctgcacatggcaggagacggtttccgactgctgtggtttcagaaggtt
tgtgctgctgtggagggagtactcaaaagtgttctgaggtgtcaccttgctccctccaca
gatgtcgtctttggtgaggattcagctgtcaatgctgcagatgaaatggaaactccctca
gcttccctcaacacatcagcagacgacagcattaacagcgtcgactcccaaaacgaagcc
agccctctgggcacagccgtggtcggtgccaagaggcggctgtcttctggcagcgatgcg
tctgtgtcacctcaaggcaaaaagccaagaatggcaaaaaggggcaatttccctcactgg
gtctgtgtgcaaaagcacatagtgtgggctggcaggaggaaagtgagaagggagctgatc
aaagatgcagactcgaggccagagggcagctgtatggagatggagtcccaggtcacagct
cacatcattgaaaaagagccagcgctcaaggagcccctgaagttcaaggttcagccccag
atggtcggtgggacagaaagcacgagggcagtgctcaagttggagccaaccactgacagt
gcaggagtttttcacgacttctttcatttcctggaagtcttcttacctaagatggtagag
acattgctaggaaaagaagcaggtactgtttaa
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