Lates calcarifer (barramundi perch): 108876232
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Entry
108876232 CDS
T04895
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
108876232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lcf03009
]
108876232
Ribosome biogenesis [BR:
lcf03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108876232
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Gene cluster
GFIT
Motif
Pfam:
SBDS
SBDS_domain_II
SBDS_C
PriA_C
2-Hacid_dh_C
DUF3801
Motif
Other DBs
NCBI-GeneID:
108876232
NCBI-ProteinID:
XP_018521116
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All DBs
Position
LG21:complement(20821612..20825150)
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AA seq
249 aa
AA seq
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MSIFTPTNQIRLTNVAVVRMKKGGKRFEIACYKNKVMSWRSGAEKDLDEVLQTHSVFVNV
SKGQVAKKDDLTKAFGTDDLTEICKQILAKGELQVSDRERQTQLETMFRDIATIVAEKCV
NPETKRPYTVNLIERAMKDIHYSVKANKSTKQQALEVIRQLKETMEIQRAHMRLRLVLPA
KEAKRLKEKLKPLLQVVESEDFDEALEMVCLVDPGCYREIDELIRCETKGRGSLEVLSLR
DVEEGDEKL
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtctatatttacgccaacaaatcaaatacggctgaccaatgtggcagtggtcaggatg
aaaaaaggagggaagcggtttgaaatcgcctgctacaagaataaagttatgagctggaga
tcaggcgcagagaaagacctggatgaggttttgcagacacactctgttttcgtgaatgtg
tccaagggtcaggtggcaaagaaggatgacttgaccaaagcttttgggacagatgatctg
acagaaatctgtaaacagatcctggccaaaggggagctccaagtgtcagacagggagagg
cagactcagctggagacaatgttcagggacattgcaactattgtggcagagaagtgtgtc
aaccctgagaccaagaggccatatacagtcaatctcattgagcgggcaatgaaggacatc
cactactctgtcaaggccaataagagcactaaacagcaggctctggaagtgatccggcag
ctgaaggagaccatggagatccagagagcccacatgaggctgcggttggtgttgcctgcc
aaagaggccaagagactgaaggagaagctgaagccgctcctgcaggttgtggagagtgaa
gacttcgatgaggcgctggaaatggtgtgtctggtggatcctggctgctacagagagatc
gatgagctgatccgctgtgagacaaaaggcagaggctctctggaggttctcagtctgagg
gatgtggaggagggagatgagaaactatag
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