Lates calcarifer (barramundi perch): 108879453
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Entry
108879453 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: krev interaction trapped protein 1
KO
K17705
Krev interaction trapped protein 1
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
108879453
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_5
FERM_M
Ank_2
Ank
Ank_4
Ank_5
Ank_3
REV
SNX17-27-31_F1_FERM
Motif
Other DBs
NCBI-GeneID:
108879453
NCBI-ProteinID:
XP_018526244
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Position
LG3:complement(14125547..14132366)
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AA seq
742 aa
AA seq
DB search
MGNEDCLEDVFVAVIRPKSQVSLSSKEYRAKAYEILLIEVPLEGKEKKRKKVLLATKIQA
GGDKSKSILDYVDETIRPISNNQGFIGKRVVHMKKFPLDGDNEGKEASLFVVPVSVKDNS
KPVYSAGSPSFYCFQDIMRVCSETSAHFCSITSKMLLALDKWLAEQHTVPHAIPALFRPA
PVERVKTNVSNPAYSSEGKLSDEGLHMGYTALEIKSKMMSLEKADMCILNPLYGSDLQYT
NRVDKVIINPYFGLGAPDYSKIQIPKREKWQHGPNCVTEDKERQWVDDFPLHRSACEGDT
ELLSKLLDSGFSVKQLDSDHWAPIHYACWHGKVEATKLLLEKGNCNPNLLNGQLSSPLHF
AARGGHAEIVQLLLQHPEIDRHIEDQQKRSPQQVCEENKQNEWEETVKLLQQASSKPYEK
VRIYRMDGSYRSVELKHGNNTTVQQIMEGMRLSQETQQYFTIWICSENLHLQLKPYHKPL
QHLRIWTEIVTDLTVLDPQRETPQLFLRRDVRLPLEIEKKVEDPLAILILFDEARHCLLK
GFFPAPDNKLITLASLLLQIIYGNYESKKHKQGFLNEENLKSIVPISKVKSKAYHWTNRI
LHEYKALSTSEGVSKEMHHLQRLFLQNCWDIPTYGAAFFTGQVYTKASASNHKVIRVYVG
VNTKGLHLMNMETKVLLISLEYGTFMWQLGHADQYFQIHSGDNKMNFIVHTKQAGLIVKL
LMKLSGQMTPNDKAVTDKYAYG
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgggcaacgaggactgcctcgaggatgtgtttgttgctgtcattcgcccaaagagtcaa
gtcagcctgagctcaaaggaatacagagccaaagcctacgagatcttgttaattgaagtg
cctttggaagggaaggagaagaaaagaaagaaggtcctcctggcgacaaagatccaagca
ggaggagacaaatccaaatccatattggattatgttgacgaaacaatcagaccgatatcc
aataatcaaggcttcataggaaagcgtgtggtgcacatgaagaaatttcctcttgatgga
gacaatgaagggaaagaggcctcgctttttgttgtgccagtcagtgttaaagacaacagc
aagcctgtctacagcgctgggagccccagcttctactgcttccaggacatcatgcgagtg
tgcagtgagaccagcgctcacttctgctccatcacctctaagatgctcctggccttagac
aagtggttagcagagcagcacaccgtacctcacgccatccccgctctgttccggccggca
cctgtagagcgggtgaagaccaacgtcagcaacccggcctacagcagcgagggcaaactg
agtgacgagggtctgcacatgggctacaccgccctggagatcaagagcaagatgatgtca
ctggagaaggcagacatgtgcatcctcaacccgctctacggctctgatctgcagtacacc
aaccgggtggacaaagttatcatcaacccatactttgggctcggagccccggactactct
aagatccagatccccaagagggagaagtggcaacacggccccaactgtgtgacagaggac
aaggagcgccagtgggtggatgactttcctctccaccgcagcgcctgtgaaggagacacg
gagctgctctctaagcttctggacagcggtttctccgtcaagcagctggacagtgaccac
tgggctcccattcactatgcctgctggcacggtaaagtggaggcaaccaagctcctgctg
gagaaaggcaactgtaatccgaacctgctgaacggccagctcagctcccctctgcacttt
gcggccagaggaggccacgcagaaatagtgcaactcctgctacagcaccctgagattgac
cggcacatagaagaccagcagaagagatcacctcagcaagtgtgtgaggagaacaaacag
aacgaatgggaggagacagtgaagcttctgcagcaagccagcagcaaaccttatgagaag
gtgcgtatctaccgcatggacgggtcgtatcgctctgtcgaactaaagcatggcaacaac
acaacggtacagcagatcatggagggcatgcgtctttcccaggagacccagcagtatttt
accatctggatctgctctgagaatcttcacctgcagctgaagccgtaccataagcccctg
cagcacctgaggatctggactgaaattgtgacagacctgacggtgctggatcctcaaagg
gagacacctcagctctttctccgcagggatgtccggctgcctctcgaaattgagaaaaag
gtggaggatccgctggccatcctcatcctgttcgacgaggcacgtcactgtctcctgaag
ggcttctttcctgctccagacaacaagctgatcactctggccagcctcctcctgcagatc
atctatggaaactacgagagcaagaagcacaagcaagggtttctcaatgaggaaaacctg
aaatctattgtgccgatatcaaaggtgaaaagcaaagcgtaccactggaccaacaggatt
cttcatgaatacaaagccctgagcaccagtgagggggtgagcaaagagatgcaccacctg
cagcgactcttcctacagaactgctgggacatcccgacctacggagcagctttcttcaca
ggccaggtctacaccaaggccagtgccagcaaccacaaagtcatccgtgtctatgtcggc
gtcaacacaaaggggctgcacctcatgaatatggagaccaaggtccttctcatcagttta
gagtatggcacattcatgtggcagcttggacatgctgaccagtacttccagatacacagt
ggtgacaacaaaatgaacttcattgtgcacacaaaacaggctggccttattgtgaagctt
ttaatgaagctgagtggacagatgactccaaatgataaagctgtaacagacaaatatgcc
tacggctga
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