Lates calcarifer (barramundi perch): 108879876
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Entry
108879876 CDS
T04895
Symbol
myo1hb
Name
(RefSeq) unconventional myosin-Ih
KO
K10356
myosin I
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
108879876 (myo1hb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108879876 (myo1hb)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108879876 (myo1hb)
03036 Chromosome and associated proteins [BR:
lcf03036
]
108879876 (myo1hb)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lcf04812
]
108879876 (myo1hb)
04147 Exosome [BR:
lcf04147
]
108879876 (myo1hb)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
108879876 (myo1hb)
Membrane trafficking [BR:
lcf04131
]
Endocytosis
Phagocytosis
Others
108879876 (myo1hb)
Others
Actin-binding proteins
Myosins
108879876 (myo1hb)
Chromosome and associated proteins [BR:
lcf03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
108879876 (myo1hb)
Cytoskeleton proteins [BR:
lcf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
108879876 (myo1hb)
Exosome [BR:
lcf04147
]
Exosomal proteins
Proteins found in most exosomes
108879876 (myo1hb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
Myosin_TH1
AAA_22
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
108879876
NCBI-ProteinID:
XP_018526825
LinkDB
All DBs
Position
LG9:10398711..10407837
Genome browser
AA seq
1028 aa
AA seq
DB search
MLRNMEASLTARDRVGIQDFVLLDAYTSESAFLDNLRKRFHENLIYTYIGTLLVSVNPYK
ELDIYSKKQMDTYMGVNFFELPPHIYALADNVFRTMLSEFNNHFILISGESGAGKTEASK
KILQFYAVSCPSTRLLNNVRDRLLLSNPVLEAFGNAKTLKNDNSSRFGKYMDIQFDHQGG
AVGGHILSYLLEKSRVVHQNHGERNFHIFYQLVEGGEEDLLRWLGLERNCQHYSYLVQGD
CAKVSSINDKSDWRTVRKALSVIDFSESDTEHLFGIIASVLHLGNIKFEADVRGYATLNN
NQEMHWVSKLLGIPAHVLQQGLTHRKIEAKTEEVFSPFSVDHAVYARDALAKAIYGRTFN
WLVNKINESLANKDSSRKTVIGLLDIYGFEVFSVNSFEQFCINYCNEKLQQLFIQLTLKS
EQEEYEMEGIEWEPVPYFNNKIICDLVEEKYRGIISLLDEECLRPGEATDLTFLEKMEEK
IGGHPHFVSHKLADQKTRKTLERGDFRLLHYAGEVTYCVVGFLDKNNDLLYRNGKEVMRQ
SKNAIIKHCFPSTEPDSKKRPETVVTQFKSSLVGLTEILMSKEPWYVRCIKPNEAKQPGR
FDDVLVRHQVKYLGLMEHLRVRRAGFAYRRKYEIFLQRYKPLCPDTWPNWKGTAAEGVQR
LIKHLGYKSDEYKMGRTKIFIRHPRTLFATEDAFQVCKHKLATRIQAKYKGYRVKGDFLK
QREAATKIETCWRGLMARKEREKRAWAVKVIKKFIKGFMTRNQPACIDNTEYLAYVRQSY
LTRLRENLPKTVLEKDSWLTPPPIMQEVSQLLKKIYIRHMVRKYIRGITPLRKAQLMLKE
QTSSMFKGKKENYPFSVCRPFMDTRISAEDINIKVLQMIRHEQIKYSVPVVKYDRNGFRP
RLRQLIFTLEAAYLVEEAKIKQRIDYSSLKGVSVSNLSDNFLILHVTCDDIKQKGDLVLQ
CDYLFEALTKLNVIANKQNCIKVVQGSVRFDIQPGREGFVDFKSGQESMVYRAKNGHLMV
ESTKTKSR
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggaacatggaggcctccctgacagcacgggatcgcgtgggcatccaggatttc
gttctcctggacgcctacaccagtgagagtgccttcctggacaacctgaggaagcgcttc
cacgagaatctcatttacacgtacattgggactctcttggtgtctgtcaacccttataaa
gagttagacatctacagcaagaaacaaatggatacctacatgggagttaacttctttgag
ttgccacctcatatatatgcgctggcagacaacgtcttccgcactatgctgtcagagttc
aacaaccacttcatcctgatctcgggggagagcggggccggaaagactgaggcctccaag
aaaatccttcagttttatgctgtcagctgcccaagtaccaggctcctgaacaatgttcga
gacagactgcttctctctaatccagtgcttgaggcttttggaaatgccaaaacccttaag
aatgacaactcaagtcgctttgggaaatacatggacatccagttcgaccaccagggtggt
gcagttggtggtcacatcctcagttacctgctggagaagtcccgtgtggttcaccagaac
cacggagagagaaacttccacatcttctatcagctggtggagggaggggaggaagatctg
ctccgctggcttggcttagagagaaactgccagcactacagttatctggtgcagggtgat
tgtgccaaagttagctctatcaatgataaaagtgactggagaacagtgcgaaaagccctc
tctgtcatagacttcagcgagagtgatactgagcacttgtttggaatcattgccagtgtg
ctccacctgggaaacatcaagtttgaagcagatgttcgaggatatgccactctcaacaac
aaccaggagatgcactgggtgtcaaagttgctggggattcctgctcatgtgctacaacag
ggcttaactcacaggaagattgaagccaaaacagaggaggtattcagtcccttctctgtg
gaccatgcagtatatgccagggatgctcttgccaaagccatctatggccgcactttcaac
tggctggtcaacaagatcaatgaatctttagctaacaaggattcctccagaaagacagtg
attggtctgctggacatctatgggtttgaggttttcagtgtgaacagcttcgagcagttt
tgcatcaactattgtaacgagaagctgcagcagcttttcatccagctgaccctcaaatca
gagcaggaggagtacgagatggaaggaattgaatgggaaccagtgccatatttcaacaac
aagatcatctgtgaccttgtggaggagaaatacagaggaatcatctcactattggacgag
gaatgtttacgtcctggagaagccacagatctcaccttcctggagaagatggaggaaaag
attggtggtcatcctcattttgtctcacataaactggcagaccaaaagacaaggaaaaca
ctggaaagaggagacttccgcctcctgcactacgctggggaagttacctactgtgtcgtt
ggattcttggacaaaaacaatgatctcttgtatcgaaacgggaaagaggtcatgagacag
tccaagaatgccatcatcaagcactgttttccttctactgaacctgacagcaagaagaga
cctgaaactgtggtgactcagtttaagagcagcctggtgggcttgacagagatcctgatg
tccaaagagccctggtacgtccgctgcattaaacccaatgaagccaagcagccaggacgc
tttgatgacgtattggtgagacatcaggtgaagtacctggggctgatggagcacctgagg
gtcaggcgcgctggatttgcttaccgccgcaaatatgagatcttcctccagaggtacaag
cctttgtgtcccgacacctggcccaactggaaaggcacagcagcagagggcgtgcagcgc
ctgatcaaacacctgggttacaaatctgatgaatacaagatgggcaggacaaaaattttc
atccgccaccctagaactctgtttgcgacagaagacgcatttcaggtctgcaaacataag
ctagcaacaagaattcaggccaagtacaaaggctacagggtgaaaggagacttcctgaaa
cagagagaagctgccactaagattgagacctgctggagaggtctgatggccagaaaagag
cgagaaaagagagcttgggctgtcaaggtcatcaagaagttcattaaaggtttcatgacc
agaaatcagccagcctgcattgacaacactgagtacctggcatatgtgaggcagagctac
ctcacacggctgagggaaaacctgcccaaaacagtcctggagaaagactcctggctcacc
cctccgcctataatgcaggaggtgtcccagcttttgaagaagatctacattcgccacatg
gtacggaaatacattcgaggaattactccactgaggaaagcacagcttatgttaaaagaa
cagacaagctccatgttcaaaggaaagaaagaaaactaccccttcagtgtgtgcagacca
ttcatggacaccaggataagtgctgaggacataaatatcaaagtgcttcagatgatacgg
cacgagcaaatcaagtacagtgtgccagtggtgaaatacgacaggaacgggttcaggcct
cgtctccggcagctcatcttcaccctggaagctgcctacctggtggaggaggccaagatc
aagcagcggatagattacagctctctgaaaggtgtatcagttagcaacctgagcgacaac
ttcctgatccttcatgttacatgtgatgacatcaagcaaaagggggatctggttctgcag
tgtgactacctgtttgaggccctgaccaagctgaatgttattgccaacaagcagaactgc
atcaaagtggtccagggcagtgtgcgatttgacatccagcccggcagagaggggtttgtg
gacttcaagagtggtcaggagtccatggtctacagggcaaagaatggccatttgatggtg
gaatcaacgaaaaccaagtcaagatga
DBGET
integrated database retrieval system
