Lates calcarifer (barramundi perch): 108880963
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Entry
108880963 CDS
T04895
Name
(RefSeq) frizzled-8
KO
K02375
frizzled 5/8
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04150
mTOR signaling pathway
lcf04310
Wnt signaling pathway
lcf04916
Melanogenesis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
108880963
04150 mTOR signaling pathway
108880963
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
108880963
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
lcf04030
]
108880963
G protein-coupled receptors [BR:
lcf04030
]
Frizzled / Smoothened family
108880963
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Gene cluster
GFIT
Motif
Pfam:
Frizzled
Fz
DUF898
B12D
Motif
Other DBs
NCBI-GeneID:
108880963
NCBI-ProteinID:
XP_018528240
UniProt:
A0A4W6CF96
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Position
LG4:3465776..3468774
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AA seq
580 aa
AA seq
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MERSIPGWCVLLTLVLHGTRCMAAKELQCQEISVPLCKGIGYNYTYMPNQFNHDTQDEAG
LEVHQFWPLVEIKCSPDLRFFLCSMYTPICLEDYKKPLPPCRSVCERAKAGCAPLMRQYG
FPWPDRMRCDLLPEQGNQDTLCMDYNRSQTTTASPVVAKPTNRPVKSFNPRKKSYGRGIP
GKHKPAASPCEPGCFCRAPMVPVTSDSHPLHNRVKTGQILNCAMPCHNPYFTQEERTFTA
FWIGLWSVLCFISTFATVATFLIDMERFKYPERPIIFLSACYMFVSVGYIVRLIAGHEEV
ACNRENGAEHIHYETTGPALCTIVFLLIYFFGMASSIWWVILSLTWFLAAGMKWGNEAIA
SYAQYFHLAAWLIPSMKSIAVLALSSVDGDSVAGICYVGNQNLDNLRGFVLAPLVIYLFI
GTMFLLAGFVSLFRIRSVIKQGGTKTDKLERLMIRIGVFTVLYTVPATVIVACYFYEQHN
RQTWEITHNCTCKTDPNRQRPDYAVFMLKYFMCLLVGITSGAWIWSGKTLDSWRTFCTRC
CWGSKASAGSMYSDVSTGLTWRSGTASSVSCPKQMPLSRV
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggagaggagcatcccgggatggtgtgtgctgttaacccttgtcttgcacggaacgcgc
tgcatggcggccaaggagctccagtgccaggagatctccgtgcctctgtgcaaaggcatc
ggctacaactacacatacatgcccaaccagttcaaccatgacacgcaggacgaagccggc
ctggaggtgcaccagttttggccgctggtggagataaagtgttccccggacttgcgcttc
ttcctctgcagcatgtacacaccgatctgtctagaggactacaagaagcccctgccgccg
tgcaggagcgtgtgtgagcgggccaaagctggctgcgctccgctcatgagacagtacggc
tttccgtggccggaccgaatgaggtgcgacctgctgcccgagcaaggcaaccaggacacg
ctgtgcatggactacaaccgcagccagaccacgactgcctctcctgtggtggcgaagccg
accaaccggcccgttaagtcgttcaaccccaggaaaaagagctatggtcgcggcatcccc
gggaaacacaaaccagcagcttccccgtgtgagccgggatgtttctgccgcgcgcccatg
gtgccggtgaccagcgacagccacccgctgcacaatcgcgtcaagactggacagatcctg
aactgcgccatgccgtgccacaatccctactttacccaggaagagaggacttttaccgcc
ttctggatcggcctgtggtccgtcctgtgtttcatctccactttcgcaactgtggcgact
ttcctaatcgacatggagaggtttaagtacccagagcgccccatcatattcctctccgcc
tgctacatgtttgtgtcagttggatacattgtcaggctgatcgctggacacgaggaagtg
gcctgcaacagagaaaacggcgctgaacacatccactatgaaaccacaggtcctgcgctc
tgcaccattgttttcctgcttatctacttcttcggcatggccagctcaatctggtgggtg
atactgtccctcacttggtttctcgccgcaggcatgaagtgggggaacgaggccatagcc
agttacgcacagtactttcatttggccgcctggctcatccccagcatgaagtcaatagca
gttctggctctgagctctgtggacggggactctgtggctgggatttgctacgtaggcaac
cagaatttggataacctgcggggtttcgtgttggcaccacttgttatctacctgttcatc
ggcaccatgtttctgctggctgggttcgtttcgctgttccggatcaggagtgtaattaag
caaggggggaccaagactgacaaactggagaggctgatgatccggattggagttttcaca
gttttatacacagtcccggccactgtcatagtggcgtgttacttttacgagcagcacaac
agacagacgtgggaaattacgcacaactgtacatgcaagacagacccgaacaggcagagg
ccggactatgctgtgttcatgctcaaatactttatgtgcctcctggtgggcatcacctcg
ggagcctggatctggtccgggaaaacactggactcctggagaactttttgcacgcggtgc
tgctggggcagtaaagcctcagcgggctccatgtacagtgacgtgagcacgggactgacc
tggagatccgggacggccagttccgtctcttgccccaaacagatgccactgtcccgggtt
tga
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