Lates calcarifer (barramundi perch): 108885596
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Entry
108885596 CDS
T04895
Name
(RefSeq) LOW QUALITY PROTEIN: DNA topoisomerase I, like
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lcf03032
]
108885596
Enzymes [BR:
lcf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
108885596
DNA replication proteins [BR:
lcf03032
]
Eukaryotic type
DNA Topoisomerases
108885596
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
108885596
NCBI-ProteinID:
XP_018535516
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Position
LG12:complement(14528789..14538619)
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AA seq
752 aa
AA seq
DB search
MSGDHSHNEDQIDCGSRVNDSHKHKDKYKEKEHKHKDHKKDKEREKSKHGNSDHKDFSDK
KHRDKEKEKMKHKDGSTDKYKDKHKEKKMKSLDGKVKKEKENGFASPQHMKSEPEDDFYH
SPKYEKSLKRERDDDDNDSEFKPKKIKTENDKKAKKRKQDEDLKSKKTKNKKGEVTDGKK
KAKKEPEEKWKWWEEERYTDGRKWKFLEHKGPVFAPPYEPLPSNVKFYYDGKVMRLSPEA
EEVATFFAKMLDHEYTTKDIFRKNFFKDWRKEMTAEEKAKITDLKKCNFSEMNEFFKAQS
EARKAMTKEEKQKIKEDNERILQEYGFCIMDNHRERIANFRIEPPGLFRGRGDHPKMGML
KRRIRPEDIIINCSKDSKHPEPPPGTRWKEVRHDNKVTWLVSWTENIQGSIKYIMLNPSS
RIKGEKDWQKYETARRLKKCVDRIRNQYREDWKSKEMRIRQRAVALYFIDKLALRAGNEK
EEGETADTVGCCSLRVEHIKLYPENDGQEYVVEFDFLGKDSIRYYNKVPVEKRVFKNLQL
FMENKEPDDDLFDRLNTSILNKHLQELMDGLTAKVFRTYNASITLQQQLKELTNAEENIP
AKILSYNRANRAVAILCNHQRAPPKTFEKSMQNLQTKIDAKREQLSDAKRELKSAKADAK
VRKDEKSKKAVETKKKAVQRIEEQLMKLEVQATDREENKQIALGTSKLNYLDPRISVAWC
KKWGIPVEKIYNKTQREKFAWAIDMADEDFEF
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgagtggggaccattcccacaacgaggaccagattgactgtggctcccgggtcaatgac
tctcacaagcataaagacaagtacaaagagaaggaacacaaacataaggaccacaagaag
gataaggaacgggagaaatcaaagcatggcaacagtgatcacaaagacttctctgacaaa
aaacatagagacaaggagaaggaaaagatgaagcacaaagatggcagcacagacaaatac
aaggacaagcacaaggagaagaagatgaaatcccttgatggtaaggtcaaaaaggaaaaa
gagaatggctttgccagtcctcaacatatgaagtctgagcctgaggatgacttttaccac
tctcctaaatatgagaagtctctgaaaagagaacgggatgatgatgataatgactctgag
ttcaagcccaagaaaataaagactgaaaatgacaagaaggccaagaaaaggaaacaagat
gaggacctcaagtccaaaaaaacaaaaaacaaaaaaggagaagtcactgatggaaaaaag
aaagcaaagaaagagccagaggagaagtggaaatggtgggaagaggagagatacacagac
ggtcgtaaatggaagtttctggaacacaaagggccggtgtttgcaccgccttatgagcct
cttccaagcaatgtcaaattttactatgatggtaaagttatgaggctcagcccagaagcc
gaagaggtggctacgttctttgccaaaatgctggaccatgagtacaccacaaaggatatt
ttccgcaaaaacttctttaaagattggaggaaggaaatgactgcagaagaaaaggctaag
attacagacctgaagaaatgcaacttttctgagatgaacgaattcttcaaggcacagtct
gaagccagaaaggccatgacaaaggaggagaaacagaaaataaaggaggacaatgagcgc
atattgcaggagtatggtttttgcatcatggacaaccacagggaacgtattgctaacttc
cgcattgaacctccggggctgttccgtggtcgcggagaccatcccaagatgggcatgctc
aaacgtcgcatcaggcctgaagacatcatcatcaactgcagcaaggactccaagcaccct
gagcctcctccaggcactagatggaaagaggttcgtcatgacaacaaagtgacttggctg
gtgtcgtggactgagaacattcaaggctccattaagtacatcatgctgaaccccagctct
aggatcaagggagagaaggattggcaaaagtatgaaacagcccgtagactgaagaaatgt
gtggaccgtatcaggaaccagtaccgtgaagactggaagtccaaggagatgaggatcaga
cagagggctgtggcactctacttcattgacaagctggctttgagagcgggtaatgagaag
gaggaaggagagactgcggacacagtgggctgctgctcgctgcgagttgaacacatcaaa
ctctacccagagaacgatggtcaagagtatgtggtggagtttgacttcctgggtaaagat
tccatccgctactacaacaaagtccccgtggagaaaagggtttttaagaatcttcagttg
tttatggagaacaaggagcctgatgatgacctgtttgatcgcctgaatacttctattctg
aacaagcacctccaggagctgatggacggtctgacagccaaagttttccgtacctacaac
gcttcaatcaccctgcagcagcaattgaaggagctcacaaatgcggaggagaacattcca
gccaagatcctgtcttacaacagggccaacagggctgtggctatcctgtgtaaccatcag
agggctccaccgaagacatttgagaagtctatgcagaacctgcagactaagattgatgct
aaaagggaacaactttctgatgccaagagagaactgaagagcgccaaggctgatgccaaa
gtacggaaagacgaaaaatccaaaaaggctgtggagacaaagaagaaggcagttcagagg
atagaagagcagctgatgaagctggaggtgcaggcgactgatcgtgaagagaacaagcaa
atcgccctcggcacctccaagctcaactatctggaccctcgcatctctgtggcttggtgt
aagaagtggggcattcccgttgagaagatctacaacaaaacccagcgtgagaaatttgcc
tgggccatcgacatggcagacgaagactttgaattttaa
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