KEGG   Lates calcarifer (barramundi perch): 108886888
Entry
108886888         CDS       T04895                                 
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
  KO
K10523  speckle-type POZ protein
Organism
lcf  Lates calcarifer (barramundi perch)
Pathway
lcf04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:lcf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    108886888 (spopla)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lcf04121]
    108886888 (spopla)
Ubiquitin system [BR:lcf04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     108886888 (spopla)
SSDB
Motif
Pfam: BTB MATH BTB_2 KLHL33-like_BTB_POZ
Other DBs
NCBI-GeneID: 108886888
NCBI-ProteinID: XP_018537511
UniProt: A0A4W6DGD0
LinkDB
Position
LG1:complement(11941939..11954124)
AA seq 392 aa
MSRVPTPPPPGEMSSGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNMLK
VPECQLSDDLGNLWECSRFTDCSLYVGGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPDVFKEMMGFIYTGKAPNLEKMADNLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSVLRQLGCKDGKNWNSNHATDIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtcacgggttcccacccctcctcctcctggggagatgtcaagtggacctgtggcagag
agctggtgttacacacaggtcaaagttgtgaagttttcctacatgtggaccataaacaac
tttagtttttgcagagaagaaatgggtgaggtcttgaagagctcaaccttctcctctggt
cccaatgacaaaatgaaatggtgtctgcgagtcaatccaaaggggcttgatgacgaaagc
aaagactatctgtcattgtatttactacttgttagttgtccaaaaagtgaagtgagagca
aagttcaagttttctttgttgaatgctaagagagaggagacaaaagcgatggaaagccaa
agagcatatagatttgtccaaggtaaagactggggcttcaaaaaatttataaggagagat
ttcctcctcgatgaagccaatggactcttaccagatgacaagctcaccctgttctgtgag
gtcagcgttgtccaggactcagttaacatttcgggccagtccaacatgaacatgctgaaa
gtcccagagtgccagctgtctgatgatctggggaacctatgggagtgttcacgcttcaca
gactgcagcctctatgtgggagggcaggagttcaaagcccacaaatccatccttgcagca
aggtcaccagtatttaatgctatgtttgaacatgaaatggaggaaagtaaaaagaaccgt
gttgacatcagtgatgtggacccagatgtctttaaggaaatgatgggcttcatctataca
ggaaaggccccaaacctggagaagatggcagacaatttgctggcagctgcagataaatat
gctttggagcgtttaaaggtcatgtgtgaagaggccttgtgcaacagcctttcagtggag
aacgtggccgacactctcatcctagcagacttgcacagtgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtgtcctgagacagctgggctgtaaagatggaaag
aactggaatagcaatcatgctacagatataatggagactgcaggctggaagtcaatgatc
cagtcccatcctcacttggtagccgaggcttttcgtgccctggcttcagcacagtgccca
ccctttggtcttcccaggaagcgtctaaaacagtcctga

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