Lates calcarifer (barramundi perch): 108888320
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Entry
108888320 CDS
T04895
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-2-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
108888320
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108888320
Ion channels [BR:
lcf04040
]
Ligand-gated channels
GABA-A
108888320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF5522
Motif
Other DBs
NCBI-GeneID:
108888320
NCBI-ProteinID:
XP_018539787
LinkDB
All DBs
Position
Unknown
AA seq
346 aa
AA seq
DB search
MNILPLNNLMASKIWTPDTFFHNGKKSVAHNMTMPNKLLRIMEDGTLLYTMRLTVQAECP
MHLEDFPMDSHSCPLKFGSYAYTKTEVTYIWSRNASQSVDVAPDGSRLNQYDLVGQSVGK
ETIKSSTGEYTVMTAHFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGV
TTVLTMTTLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRGWAWDGK
SVISDKKKEAAITKKNNAYAVAVANYAPNITKDSTLPTISKCALGNLNKTTAETKPEQNK
KTFNSVSKIDRISRIMFPVLFGSFNLVYWATYLNREPVIKDLDPSK
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaacattctgcctcttaacaacctgatggccagtaagatctggacccctgacaccttc
ttccacaatggcaagaaatctgtggcccacaatatgacaatgcccaacaagctgctgagg
atcatggaggatggaaccttgctctacactatgaggctgacagttcaagctgagtgtccc
atgcaccttgaagacttccccatggactctcactcatgtcctctcaagtttggcagctat
gcctacactaagacagaggttacttacatctggagtcgtaatgcctcccagtcagttgat
gttgcacctgatggatccagactcaaccagtatgacttggtgggccagagtgtgggaaag
gagaccattaaatccagtaccggagaatacacagtcatgacagctcacttccatctgaag
aggaagattggctactttgttatccagacatatctaccctgtatcatgacagtcatcctc
tcccaggtttctttctggctcaatagagagtcggtgccagccagaactgtctttggtgta
actacagttctcacaatgacaaccctgagtattagtgcccgtaattcactgcctaaggtg
gcctatgctacagctatggactggttcatcgccgtctgttatgcctttgtcttctctgca
ctcattgaatttgctaccgtcaactacttcaccaagagaggatgggcctgggatggaaag
agcgtcatcagtgacaagaaaaaggaagcagccatcacaaagaagaacaatgcctatgct
gtagctgtggccaactatgctcccaacattacaaaagactctacgctgcccacaatttcc
aagtgtgccctgggcaatctcaacaagaccacagcagagacaaagcctgagcagaacaag
aaaacttttaacagcgtcagcaaaattgaccgcatctcccgcatcatgttccctgtgctg
tttgggagctttaacctggtctactgggccacctacctgaacagagaaccagtcattaaa
gatctggatccttccaaatga
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