Lates calcarifer (barramundi perch): 108890032
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Entry
108890032 CDS
T04895
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
lcf
Lates calcarifer (barramundi perch)
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lcf01009
]
108890032 (ptprub)
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
108890032 (ptprub)
Protein phosphatases and associated proteins [BR:
lcf01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
108890032 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
MAM
fn3
DSPc
ig
Y_phosphatase3
PTPlike_phytase
Ig_3
Pur_ac_phosph_N
Ig_2
PTP_tm
I-set
Motif
Other DBs
NCBI-GeneID:
108890032
NCBI-ProteinID:
XP_018542302
UniProt:
A0A4W6CQ36
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All DBs
Position
LG15:23201783..23351005
Genome browser
AA seq
1449 aa
AA seq
DB search
MNTCAFLLILTVQIYADGIEGPTAAGCTFEEDSDPNLCDFTQGEEDDFDWLLFRTYSSPY
ASSDLLRGSYMLVNSSQHAVGHRAQLLLQSLSENDTHCVQFSYFLYSRDGHSPGALRAYV
RVNGGPLGSPVWNTSGSHGKQWHQVELAVSTFWPNEYQVLIEATVSRERRGYIAIDDIMV
LNYPCYKAPHFSRLGDEEVNAGQNATFQCVAAGRASEAEMFLLERHNGDILTTASVKHLS
HRRFVVSFQLDSVQRTDQDLYRCVTQSPRGSGVSNFAELVVKVPPSPIAPPQLLRAGSTY
LIIQLNTNSILGDGPIIRKEIEYRASQSPWSEVHGVNMVTYKLWHLDPDTEYHISVLLTR
PGEGGTGPPGPPLVSRTKCAEPMRALRGLTATDIQPRQLSLQWENLAFNLTRCHTYSVSL
CYRYTTAGGGGGHNTTVRECLAVEHNASRFTLRDLPPYHGIHVRLSLANPEGKKEGREVT
FQTEEDIPGGIAPESLTFTPLDDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPG
PRRTVSKLKNETYHMFSNLHPGTTYLISVRARTAKGFGQTALTEITTNISAPTFDYGDMP
SPLSETESTITVLLRPAQGRGAPVSTYQVVVEEETVKKVKRELGLQECFPLPMSHGEAQA
RGTPHYYTAELPPSSLPEASPFTVGDNHTYNGYWNSPLDPRKSYLVYFQAMSNFRGESRI
NCIRIARKAACKDHRKALEVSQHSEEMGLILGVCAGGLVVLILLLGAVIIIIKKGRDYYS
YYPKPVNMNKTPITYRQEKSHMGSMERSFTDQSTLQEDERMALSFMDAHTCGTRSDARSS
VNEASSLLGGSPRHQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESFF
DGWDCTKKKDKTKGRHDTLLGYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSNH
FIATQGPKQETLYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDDSEMYGDIKITLL
KTETLAEYTVRTFALERRGYSTKHEVRQFHFTSWPEHGVPYHATGLLAFIRRVKASTPPD
AGPVVVHCSVGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIFI
HDAILEACLCGETAILVNEFAVAYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECSI
ALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALADSFHRQAAFIVTPHPLPGT
TADFWRLVFDYGCTAVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMEVEFLSMSADEDVI
TRLFRVKNVTRLQEGQLVVCQFQFLRWSAYRDVPDSKKAFLNLLAQVHKWQRECGEGRTV
VHCLNGGGRSGTFCACNILLEMIQYQNMVDIFYAVKTLRNCKPNMVESLDQYRFCYDLVL
EYLDCFEGR
NT seq
4350 nt
NT seq
+upstream
nt +downstream
nt
atgaacacctgcgcctttctgttgattttgactgttcagatctacgccgatggcatcgag
gggccaacagctgctggctgcacgttcgaagaggattcagaccctaatctgtgtgacttc
acccagggggaggaggatgactttgactggctgttgtttcggacgtacagttcaccttat
gccagctctgacctcctgcggggatcttatatgttggtgaactcctcccagcatgccgtg
ggtcatcgtgctcagctgctgctgcagtcgctcagtgaaaatgacacacactgcgtccag
ttcagctacttcctgtacagtcgcgatggccacagccccggggccctgagggcatacgta
cgagtcaacggtggtccgctcggcagtccagtgtggaacacgtcggggtctcacggaaag
cagtggcatcaggttgagctggctgtcagcaccttctggcctaatgaataccaggttctg
attgaggcaacagtgtcccgggagcggcgaggttacattgccatagatgacatcatggtg
ctcaactatccctgctataaggcgccgcacttctccaggctaggagatgaggaggtcaat
gctgggcaaaatgccactttccagtgtgttgctgctggaagggcgtctgaggctgagatg
ttcctgctggagagacacaatggggacattttaacaacagcgtcggtcaagcacctgagt
catcggcgctttgtggtatccttccagctagacagtgtccagcgaacagatcaagacctt
taccgctgtgtcactcagtcccccaggggctccggggtctcaaactttgctgaactcgtt
gtgaaagtacctccatcccccatcgcgccgccccagctgctgcgcgccggctccacttac
ctgatcatccagctcaacaccaactctatcctgggagatggccccattatcaggaaggag
attgagtaccgtgccagccagtctccatggtctgaggtgcacggggtcaacatggtcacc
tacaagctgtggcacctggatccagacacagagtaccacatcagtgtgctgctgactcgg
cctggagaggggggaactggccctcccggaccgcctctggttagcaggacaaaatgtgca
gagcccatgcgtgctctgcggggcctcacagccacagacatccagcccaggcagttgtcc
ctgcagtgggagaatttggcgttcaacctgacacgctgccacacctactcagtgtccctg
tgctaccgctacactacggcgggaggtggcggcggccacaacaccactgtgcgcgagtgc
ctggcagtggaacacaacgcctcacgcttcacgctacgtgatctgccaccctaccacggc
atccatgtccgcctgtcactggccaatccagaggggaagaaagagggcagagaggtcacc
ttccagactgaggaggacattcccggaggcatagcaccggagtcgctcaccttcacccca
ctggatgacatgatcttcctgaagtgggaggagcccgtcgagcccaacggccttattacc
caatatgagatcagttaccaaagtattgagtcgtctgatccaggcatcaacgtgccggga
cctagaagaacggtgtcgaagctgaagaatgagacctatcacatgttctccaacctccac
cctggaacaacttacctaatctccgtccgagcccgtacagccaagggcttcgggcagacc
gccctcacggaaatcaccaccaacatctcagctcccacatttgattatggtgacatgccg
tcccccctgagtgagacagagagcacaattactgtcctgctgcgccctgcccaaggcaga
ggggcacctgtcagcacataccaggtggtggttgaggaagagactgtgaagaaggtgaag
agggagctggggcttcaggagtgcttccccttgcctatgtcccacggtgaggcccaggcc
cggggcacaccacactactacacagccgagctgccacccagcagtcttccggaggccagt
cccttcaccgtgggcgacaatcacacgtacaacggctactggaacagccctctggaccca
cgcaagagctacctcgtctacttccaagctatgagcaacttcagaggggaatccagaata
aactgcatccgcatcgctcgcaaagcggcctgcaaagatcaccgcaaggctctggaggtg
tcccaacactctgaggagatggggctgattctcggggtgtgtgccggaggcctggtggtc
ctcatcctactgctgggtgccgtcatcatcatcattaagaaaggaagggactactactct
tactatccgaaaccagtgaacatgaataagacgccaattacctatcggcaggagaagagc
catatgggctccatggagcgcagtttcacagaccagagcaccctacaggaggatgaaaga
atggctctttccttcatggatgcacacacctgcggcacgcgcagtgatgctcgtagctca
gtgaatgaggccagcagcctgctggggggctccccgaggcaccagtgcggacgtaaaggc
tccccctaccacactgggcagctccaccctgccgtccgagtggctgacctcctccagcac
atcaaccagatgaagactgccgagggctacggctttaaacaggaatatgagagtttcttt
gatggctgggactgcacaaagaagaaggacaaaaccaaagggaggcatgacaccttgctg
ggatatgaccgccacagagtgaagctccaccctctcctgggagaccccaactcagactat
atcaacgctaactacattgatattcggattaacagggaaggctaccatcgatccaaccac
ttcatcgccactcaggggcccaagcaggagactctgtatgatttttggaggatggtatgg
caggaaaattgcttcagcatcgtcatgatcactaagctggtggaggttggcagggtgaaa
tgctgtaaatactggcctgatgacagcgagatgtatggtgacattaaaatcactctgctt
aagacggagacactggctgaatacacagttcgtacctttgccttggagaggagaggatac
tcaaccaagcacgaggtgcgtcagttccactttacatcctggcctgaacacggggtgccc
tatcacgccactggactgttagcctttatacgaagagtgaaagcctctacacctcctgat
gctggccctgtggtggtccactgcagtgtgggggcgggccgcaccggctgctacatcgtg
ctggatgtcatgttggacatggctgagtgtgagggcgtggtggatatctacaactgtgtc
aaaaccctctgctctcgacgcatcaacatgatccagacagaggagcagtatatcttcatc
catgatgccattctggaggcctgcctgtgcggagagacggccatcctggtgaacgagttc
gccgtcgcctacaaagagatgctgcgagtggattcccagagtaattcttctcaactgcgt
gaagagttccagacgctcaactctgtgactccccacttggatgtggaagagtgcagcatt
gctctgttgcccagaaaccgagaaaagaaccgcagcatggatgtactgccgccagatcgc
gccttggccttcctggtcacaacagaaggggagagcaacaactacatcaacgctgctctt
gccgacagcttccatcggcaggctgctttcatcgtgacccctcaccctctgccgggtacc
acggcggacttttggaggctggtctttgactacggctgcacagcggtggtcatgctcaac
caactcaaccagtcaaactctgcttggccgtgtgttcaatactggccggagcctggttta
cagcagtacgggcccatggaggtggagtttctctccatgtcagcagatgaggatgtcatt
actcgcctgtttcgggtcaagaacgtcacaaggctccaagagggccagctggtggtgtgt
cagttccagttcctgcgctggtcggcgtatcgtgatgttcccgactccaagaaggctttc
ctcaacctgctggctcaagtgcacaagtggcaaagagagtgtggagaaggacgcactgtt
gtccactgccttaatggtggtggtcgcagtgggaccttctgtgcctgcaacatcctactt
gagatgatccagtaccagaacatggtagacatcttctatgctgtcaaaactctacgcaac
tgcaaacccaacatggtggagtccctggatcagtatcgattctgctatgaccttgtcctg
gagtacttggactgctttgaagggagatag
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