Lates calcarifer (barramundi perch): 108891357
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Entry
108891357 CDS
T04895
Name
(RefSeq) STAM-binding protein-like A
KO
K11866
STAM-binding protein [EC:
3.4.19.12
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108891357
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lcf01002
]
108891357
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108891357
04121 Ubiquitin system [BR:
lcf04121
]
108891357
Enzymes [BR:
lcf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
108891357
Peptidases and inhibitors [BR:
lcf01002
]
Metallo peptidases
Family M67
108891357
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Others
Others
108891357
Ubiquitin system [BR:
lcf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
108891357
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP8_dimer
JAB
Prok-JAB
DUF5876
Motif
Other DBs
NCBI-GeneID:
108891357
NCBI-ProteinID:
XP_018544013
UniProt:
A0A4W6FJY6
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All DBs
Position
LG13:complement(24347257..24354523)
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AA seq
435 aa
AA seq
DB search
MADHTDISLQPEERVRALTKKGSTVEVNDDVPPRRYFRSGMEMIRMANIYTEEGNIEHAF
VLYNKYITLFIEKLPKHREYKTANIPEKKDTLKKLKDVAFPQAEILKKALLRRFEQEYAQ
YLVKKKTEEDALAQEQSRQRALDAERERVAEMQRRQREQEQFSAFEEMIRRQELEKERQR
VLLEFATPAAPSPDMPLIPGIQGPPLVSPTPPHSPGDTYTGSNHQYNHPPATIGTPASGP
PSFDRSLKPGSLVSPGNNNTMVDALRQLAVPAELCRSFLRLAEANTSRAVETCGILCGKL
TRNAFTVTHVIVPKQCGGPDYCDTENEEELFLIQDQYDLITLGWIHTHPTQTAFLSSVDL
HTHCSYQMMLPEAIAIVCSPKFNEIGYFRLTDRGTDEISTCKQKGFHPHSKDPPLFTHAG
HVTITDDTVSMMDLR
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccacactgatatcagtctgcagccggaggagcgagtccgtgctctgaccaag
aagggaagcacggtggaggtgaacgacgacgtgcccccccgacgctacttccgctcgggc
atggagatgatccgcatggcgaacatctacacggaggagggcaacatcgagcacgccttc
gtcctttacaataagtatattacactctttatagaaaaacttcccaagcatcgggaatac
aagacggctaacatccctgagaagaaggacacactaaagaaactgaaggatgttgcgttt
cctcaagcagagatcctgaaaaaagctcttctgaggagatttgaacaagaatatgcacaa
tatcttgtcaaaaagaaaacggaggaggacgccctggcgcaggagcagtccaggcagcga
gcgctggacgccgagcgggagcgcgtggccgaaatgcagcggcggcagcgggagcaggag
cagttcagtgccttcgaggagatgatccgccgccaggagctggagaaggagcgccaacgc
gtgctcctcgagttcgccacgcccgccgcgccttcccccgacatgccgctcatcccaggc
atccagggcccgccgctcgtctcccccacccctccccacagccccggggacacgtacacc
ggctccaaccaccagtacaaccaccctcccgccaccatcggcacacctgcctccggcccg
cccagcttcgaccgctcgctcaagcccggctctctggtcagcccggggaacaacaataca
atggtggatgccctccggcagttggccgtccccgctgagctgtgccggagctttctgagg
ctggccgaggccaacacaagccgagctgtagaaacttgtggcatcctgtgtggcaaactg
accagaaatgcgtttactgtgacccacgtcatcgtaccaaagcagtgcggcggaccggac
tattgtgacacggaaaacgaagaggaactctttctcatacaggaccagtacgatctcatc
accctgggctggatacatactcaccccacacagacggccttcctgtccagcgtcgacctc
cacacacactgctcctaccagatgatgctgccggaggccatcgccatcgtctgctcgccg
aaattcaacgaaattggttacttcaggttgacggatcgagggacggatgagatctccaca
tgtaaacagaaaggttttcacccgcacagcaaagatcctccactatttacacacgcggga
cacgtcaccatcaccgacgacactgtgtccatgatggatttgcggtga
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