Lates calcarifer (barramundi perch): 108893648
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Entry
108893648 CDS
T04895
Name
(RefSeq) sarcoplasmic/endoplasmic reticulum calcium ATPase 1
KO
K05853
P-type Ca2+ transporter type 2A [EC:
7.2.2.10
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04020
Calcium signaling pathway
lcf04148
Efferocytosis
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
108893648
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
108893648
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108893648
04261 Adrenergic signaling in cardiomyocytes
108893648
Enzymes [BR:
lcf01000
]
7. Translocases
7.2 Catalysing the translocation of inorganic cations
7.2.2 Linked to the hydrolysis of a nucleoside triphosphate
7.2.2.10 P-type Ca2+ transporter
108893648
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Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
Cation_ATPase_C
Cation_ATPase
Cation_ATPase_N
Hydrolase
Hydrolase_3
HAD
Motif
Other DBs
NCBI-GeneID:
108893648
NCBI-ProteinID:
XP_018547359
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All DBs
Position
LG20:8059177..8103485
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AA seq
1004 aa
AA seq
DB search
MENAHTKSATEVLDNFGVNENTGLTLEQVKVNLEKYGPNELPAEEGKSLWELVVEQFEDL
LVRILLLAACVSFVLALFEEGEETTTAFVEPVVILLILIANAVIGVWQERNAENAIEALK
EYEPEMGKVYRMNRKAVQRIKARDIVPGDIVEVAVGDKVPADIRVTSIKSTTLRVDQSIL
TGESVSVIKHTDPVPDPRAVNQDKKNMLFSGTNIAAGRAIGVVVATGVATEIGKIRNQMA
STEQEKTPLQQKLDEFGQQLSKVISLICVAVWVINIGHFGDPVHGGSWVRGAIYYFKIAV
ALAVAAIPEGLPAVITTCLALGTRRMAKKNAIVRSLPSVETLGCTSVICSDKTGTLTTNQ
MSVCRMFITDKVEDSNCTLHEFSITGSTYAPEGQILKGDRPIQCGDYDGLLELATVCSMC
NDSSLDYNEAKGVYEKVGEATETALTTLVEKMNVFKTDLTGLSKVERAGACNSVIRQLMK
KEFTLEFSRDRKSMSVFCTPVKPGSQSKMFIKGAPESVIERCQYLRVGTGKVTLTPALRD
QLLSKIRDWGTGRDTLRCLALATHDTPPRKEDMDLENSSKFVEYELGLTFVGCVGMLDPP
RKEVIGSVKLCNEAGIRVIMITGDNKGTAVAICRRIGIFGEEEDVTGKAYTGREFDDLPP
EAQREAVKRARCFARVEPAHKSKIVGYLQSFDEITAMTGDGVNDAPALKKAEIGIAMGSG
TAVAKSASEMVLSDDNFSTIVAAVEEGRAIYNNMKQFIRYLISSNVGEVVCIFLTAILGL
PEALIPVQLLWVNLVTDGLPATALGFNPPDLDIMDKPPRNPKEPLISGWLFFRYLAIGGY
VGLGTVSAATWWYLFDEEGPQVSFYQLRHFMQCTEDNPMFQEIDCEVFESRYPTTMALSV
LVTIEMFNALNSLSENQSLVRMPPWVNIWLLGAIILSLSLHFLILYVEPLPLIFQVTPLR
WSQWIVVLKISIPVILLDEALKYVSRNHLEGDDEKKYRRRWQLN
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatgcgcacactaaatcggcgactgaagttttagacaacttcggtgtgaacgaa
aacactgggctgactctggaacaagtcaaagtcaatttggagaaatatggacccaacgag
ctcccggctgaagaaggcaaatccctgtgggagctggtggtggagcagtttgaagacctc
ctggtcaggatcctgctgctagctgcctgtgtttcctttgtgttggctctgtttgaggag
ggagaggagacaaccaccgcctttgtcgagcctgttgttattcttctcatcctcatcgcc
aacgctgttatcggggtctggcaggagcgcaatgctgagaatgccatcgaagctctgaaa
gagtatgaacctgagatgggaaaggtgtatcgcatgaaccgcaaggctgtccagaggatc
aaagccagagacatcgtcccaggggacatagtggaggtggctgttggtgacaaggtgcct
gctgacatcagagtgacctctataaagtccaccaccctgcgagtggaccagtccatcctc
acaggggagtctgtgtctgtcatcaaacacactgaccctgttcctgaccccagagctgtc
aaccaggacaaaaagaacatgctgttttctggcaccaacattgctgcaggccgcgccata
ggtgttgtcgtcgctaccggcgtggccacagagatcggtaagatccgtaatcagatggca
tctacagagcaagagaagacgccgctgcagcagaagctggatgagttcggccagcagctc
tccaaggtcatctccctgatctgcgtggctgtgtgggttatcaacattggccacttcggg
gaccccgtccacggtggctcctgggtcaggggtgccatttactactttaagatcgctgtg
gctctggctgtggccgccatccctgagggcctgcctgctgtcatcaccacctgcctggcc
ctcggcacgcgtcgcatggccaagaagaacgccattgttcgcagcctgccctctgttgag
acactgggctgtacctctgttatctgctctgacaagactggcaccctcaccaccaaccag
atgtctgtttgcagaatgttcatcacagataaggtggaagattcaaactgcacccttcat
gagttctctataactggttctacatatgcccctgagggacaaatactgaaaggagacagg
cctatccagtgtggtgactatgatggacttttggagttggccactgtgtgctctatgtgc
aacgactcttcactggactacaatgaggccaaaggtgtttatgagaaggtgggtgaagcc
acagagacggctctcaccaccttggtggagaagatgaatgtcttcaagactgacctaact
ggactcagcaaggtggaacgtgctggggcctgcaactcggtgatcaggcagttgatgaag
aaggagttcaccctggagttctctcgtgatcgcaagtccatgtctgtcttctgcacccca
gtcaagccaggctcccagagcaagatgttcatcaagggtgctccagagagtgtgattgag
cggtgtcagtacctacgagtgggaacagggaaggtcacactgacaccagccctgcgtgac
caactgttgtctaagatcagggactgggggacaggcagggacaccctgcgctgtctggcc
ctggctactcatgacaccccgccacgcaaagaggacatggacttggagaattccagcaag
ttcgtggagtatgagttgggtctaacatttgttggctgtgtgggcatgctcgacccgccc
agaaaggaggtgatcggttcagtgaaactgtgcaacgaggcaggtatccgtgttatcatg
atcacaggagacaacaagggcacagctgtggccatctgcagacgaattggcatcttcggg
gaggaggaggacgtgacaggaaaggcctacacgggccgcgagtttgatgatctcccaccg
gaggcgcagagagaagccgtcaagcgggcgcggtgcttcgcccgggtcgagccggctcac
aagtctaagatcgttggatacctgcagtctttcgatgagattactgccatgacaggagat
ggtgtgaacgacgccccagccctgaagaaagcagagatcggcattgctatgggctctgga
actgcagtggccaagtcagcatctgagatggtgctgtctgatgataacttttccaccatc
gtggctgcggtggaggagggcagagcgatctacaataacatgaagcagttcatcagatac
ctcatctcctctaatgtgggagaagtcgtctgcatcttcctgacagccatcctgggtctc
cctgaggctttgattccagtccagctgctgtgggttaatctggtgaccgatggcctgcca
gccactgccctgggctttaaccccccagacctggacatcatggacaaacctccccgcaac
ccgaaggagcctctcatctctggctggctcttcttcagatacctggccattggaggatat
gtgggtcttggaacagtgagtgctgccacatggtggtacctgtttgatgaagaaggcccg
caagtgtctttctatcagctgagacatttcatgcagtgtaccgaggacaaccccatgttc
caggaaatagactgtgaggtgtttgaatcccgctaccccacaaccatggccctgtctgtg
ctagtcactatcgaaatgttcaacgcactcaacagtttgtctgagaaccagtccctggtc
aggatgcctccctgggtcaatatctggctgctgggggccatcatcctctccctctccctc
cacttcttaatcctctacgttgagcctttgccgttgatcttccaggtgacccccctgcgc
tggtcacagtggatcgtggtcttgaagatttccatcccagtcatcctcctggatgaggca
ctgaaatatgtctccaggaaccatctagaaggtgatgacgagaagaaatatcggaggaga
tggcagctgaactaa
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