Lates calcarifer (barramundi perch): 108895317
Help
Entry
108895317 CDS
T04895
Name
(RefSeq) DNA-directed DNA/RNA polymerase mu
KO
K03513
DNA polymerase mu [EC:
2.7.7.7
]
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108895317
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lcf03400
]
108895317
Enzymes [BR:
lcf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
108895317
DNA repair and recombination proteins [BR:
lcf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
108895317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_thumb
DNA_pol_lambd_f
HHH_8
DNA_pol_B_palm
NTP_transf_2
BRCT
Motif
Other DBs
NCBI-GeneID:
108895317
NCBI-ProteinID:
XP_018549575
UniProt:
A0A4W6EUZ2
LinkDB
All DBs
Position
LG9:1078421..1083280
Genome browser
AA seq
548 aa
AA seq
DB search
MVPLKRRKVAGSNKTEAESSGDNGANKFPQVVLFLLERKMGTSRRAFLSQLGRKKGFQVE
ELFSESVTHVISENNSGDEVRTWLDTQGGGRGRTPVHLLDISWYTESMRAGLPVQILDRH
KLQEQQVEAEVVTFSVPSYACQRRTTLENHNTVLTDALSLLAENAELSDEDGRGVAFRRA
AAVLRSLPEPVTDMKQLRGLPCLGDHSLRVIKDILEDGASREFESTKQSERFKALKVLTG
IFGVGSRTADRWIREGIHTLQQLRDSGQSLNRAQQAGLEHYDDLNRPLTAAEAEAVGEIV
ERAVVSVLPGAQITLTGGFRRGKLTGHDVDFLITHPDEGREEGLMSKVVSWLESQGFLLY
QKTTRNSYLESKDGPARPPANMDRFERCFSIFKLTMEERRGTEQPENGERNPNPAEDTLS
VGARSGSQTDENTPPQSQVPADERRHRVSGEDGGQEEAKPAAHKPWRAVRVDLVVSPISQ
FAFALLGWTGSKLFERELRRWAGHEKAMSLSSHALYDNTQSRYLRATSEEEIFAHLGLEF
IPPSERNA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggtgccattaaagcggagaaaagtcgctgggagtaataagactgaagctgagagcagt
ggagataatggagcgaacaagttccctcaggtcgttttattcctgctggagagaaaaatg
ggaacgagtcgaagagctttcctctctcagctcggtcggaagaaaggatttcaggtggag
gagctgttcagtgaaagcgtcacacacgtcatttctgaaaacaactctggcgacgaggtg
aggacgtggctggacacgcagggcggaggtcgaggccggacgccggttcacctcctggac
atcagctggtacacagagagcatgagagcaggacttcctgttcagatcctggacagacac
aaactacaggagcagcaggttgaagcggaggttgtgacgttttcagtaccaagctacgcc
tgtcagagaagaaccactctggaaaaccacaacaccgtgctcaccgatgctttgtcgctc
ctggccgagaacgcagagctcagcgatgaggacggacgaggcgtcgcgtttcgccgggcg
gccgctgtgttacggtctctgcccgagcccgtgacggacatgaagcagctgagagggctg
ccctgccttggagaccattcgctgagggtcatcaaggacattttggaggacggagcgtcg
agagagttcgagtctacgaagcagtctgagcggtttaaagctttaaaggttttaaccggc
atctttggagttggatcaagaacagcagaccggtggatcagagaggggattcacactctt
cagcagttacgagattcaggacagtcactcaatcgagcgcaacaagcaggtctggagcac
tacgacgacctgaaccggccgctcactgcggccgaggccgaggctgtcggagagatcgtg
gagagagccgtggtttctgttttaccaggagcacagatcacactgaccggaggattcagg
agaggaaagctgaccggtcacgacgtcgacttcctgataactcacccagacgaaggcaga
gaggaggggctgatgtctaaggtggtgtcatggctggagtctcagggtttcctgttgtac
cagaaaaccaccaggaactcgtacctggagtctaaggacggtcctgctcggccccccgcc
aacatggaccgcttcgagaggtgtttctccatcttcaaactgaccatggaggagagacga
ggaacagaacagccagaaaacggcgagcgaaatccaaatccagcggaggacacgctcagt
gttggagcccgatctggttcacagacagatgaaaatacacctccacagagtcaggtcccg
gctgacgaacggagacaccgtgtgtccggtgaagatggaggtcaggaggaggcaaaacct
gctgcacacaagccgtggagagctgtgagagtggatctggtggtttctcccatcagccag
tttgcttttgctcttctgggctggaccggatccaagttgtttgagagagagctgcgacgc
tgggcgggacatgagaaggccatgtctctgagcagccatgctctgtatgataacacacag
agcaggtatctccgagcgacgtcagaggaggagatattcgctcatcttggtctggagttt
attccaccgtcagagagaaacgcctga
DBGET
integrated database retrieval system
