Lates calcarifer (barramundi perch): 108896293
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Entry
108896293 CDS
T04895
Symbol
cacnb2a
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2a isoform X2
KO
K04863
voltage-dependent calcium channel beta-2
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04010
MAPK signaling pathway
lcf04260
Cardiac muscle contraction
lcf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
108896293 (cacnb2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
108896293 (cacnb2a)
04261 Adrenergic signaling in cardiomyocytes
108896293 (cacnb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lcf04040
]
108896293 (cacnb2a)
Ion channels [BR:
lcf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
108896293 (cacnb2a)
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GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
Motif
Other DBs
NCBI-GeneID:
108896293
NCBI-ProteinID:
XP_018550864
UniProt:
A0A4W6FKC6
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Position
LG24:complement(14096531..14181416)
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AA seq
693 aa
AA seq
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MKATWIRLLKRAKGGRVKSSDACGSADSYTSRPSDSDVSLEEDKEAVRREAERQAQAQLD
KAKTKPVAFAVRTNVNYSPSHDDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGC
EIGFIPSPVKLENTRILQEQRAKQGKFHSSKLGANSSSSLGEVVPNSRKSTPPSSAIDID
ATGLDPEDNELPVNLRSPKASPNTVMSPLAKEKRMPFFKKTEHIPPYDVVPSMRPVVLVG
PSLKGYEVTDMMQKALFDFLKHRFEGRISITRVTADISLAKRSVLNNPSKHAIIERSNTR
SNLAEVQSEIERIFELARTLQLVVLDADTINHPSQLGKTSLAPIIVYVKITSPKVLQRLI
KSRGKSQAKHLNVQMVAADKLAQCPPEMFDIILDENQLEDACEHMADYLEAYWKSTHPTS
CSPPNPLLTKLPTAALPSSPAPVSGVQGSSAEQKGDKALVERKGSREDHQHHHHHHHHHH
QSQDQADADAEAEGEGNEEERPLRTESSRRAQHVHHRSSSTRTEHHNHHHHHHHHSSRAR
GLSRQETLDSETPESRESRESRESKDSAYIEPRTQLLHQEEEEEDEDLGEGHPQQQQRYE
PLPHRDHNHHHHHHHHRGGGDEAGHGTGHHRSKEREQDHNERNKQRSHHHHRPARDHHHH
YYDRDRDRDREGEVAPKKRGDAGEWVRDSYIHQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgaaggccacctggatccgcttgctgaaacgagccaagggaggtcgcgtcaagagctcc
gatgcctgtggttcggccgactcctacaccagccgtccatcagactccgatgtgtccctg
gaggaggataaggaggcagtgcgcagagaggcagagcgacaggctcaggcacagctcgac
aaggccaagaccaaaccagttgcatttgctgttcgcacaaatgtcaactacagcccaagt
cacgatgatgatgtccctgtgccaggcatggccatctcctttgaggctaaagacttcctc
catgtcaaagagaaattcaacaatgactggtggataggacgcttggtgaaggaaggctgt
gaaatcggtttcatccccagtccagtgaagcttgaaaacactcgtatcctccaggagcag
agagccaaacaaggcaaattccactccagtaaattgggagcaaactcatcttctagttta
ggtgaagtggttcctaactcacggaaatctactcctccttcatctgccattgacatagac
gccacaggcttagaccccgaggacaatgagcttcccgtcaacctgcgctcccctaaagcc
agtccaaacactgtcatgtcacccctagcaaaagagaaacgaatgcccttctttaagaag
acggaacacattcctccgtacgacgttgtgccttccatgcggcccgtggttctggttgga
ccgtcactgaagggctacgaggtgacagacatgatgcaaaaagcactgtttgactttttg
aaacaccgattcgagggaagaatatcaatcactcgtgtcacggcagacatctctcttgcc
aagcgctcagtcctgaacaatcccagcaagcacgccatcatcgaacgctccaacacacgc
tcgaacttggctgaagtccagagtgagattgagcgtattttcgaactggccaggacgtta
cagctggtggttctggacgccgacaccatcaaccacccatcacagctggggaagacttcc
ctcgcccccatcattgtctacgtcaagatcacctcccccaaggtgcttcagcggctcatc
aagtccagaggcaagtctcaggccaaacacctcaatgtccagatggtggcagctgacaag
ctggctcagtgccctcctgagatgtttgacatcattctcgatgagaaccagctggaggac
gcatgtgagcatatggctgattacctggaggcctactggaaaagcactcaccccaccagc
tgcagcccccccaacccactgctaaccaagctgcccacagccgccctgccctccagccca
gccccagtctccggcgtgcagggcagcagtgcagagcagaagggagacaaagcgttagtg
gagagaaagggctccagagaggatcaccagcaccatcatcaccatcaccaccaccaccac
cagagtcaggaccaagctgatgctgacgcagaggctgagggggagggcaatgaggaggag
aggcccctgaggacagagtcgtccaggagagcccagcacgtccaccaccgttcgtcttcc
accaggactgagcaccacaaccaccatcaccaccaccaccaccacagcagtcgagccagg
ggcctctcccggcaggagactttggactctgagaccccagagagccgagaaagcagagag
agccgagagagcaaggactcggcttacattgagccacgcactcagctcctccaccaggaa
gaggaggaggaggacgaggatctaggggaggggcacccccagcagcaacagcgctacgag
ccgctgccccaccgggaccacaaccaccaccaccaccaccaccatcaccgcggtggaggc
gacgaggccggccatggcacgggacaccaccgctccaaagagcgcgaacaggaccataac
gaacgcaacaagcagcgctctcaccaccaccaccggccggcacgcgaccaccaccatcat
tactacgaccgggacagagacagggaccgagagggggaggtggctcccaaaaagaggggt
gatgcaggggaatgggtcagagactcctacatccaccagtga
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