Lates calcarifer (barramundi perch): 108897093
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Entry
108897093 CDS
T04895
Name
(RefSeq) signal transducing adapter molecule 2 isoform X9
KO
K04705
signal transducing adaptor molecule
Organism
lcf
Lates calcarifer (barramundi perch)
Pathway
lcf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
lcf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108897093
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lcf04131
]
108897093
Membrane trafficking [BR:
lcf04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
108897093
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
VHS
SH3_1
SH3_9
SH3_2
UIM
GAT
Dynactin_p22
SH3_10
Motif
Other DBs
NCBI-GeneID:
108897093
NCBI-ProteinID:
XP_018552036
UniProt:
A0A4W6DTV0
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Position
LG1:complement(6806656..6857488)
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AA seq
510 aa
AA seq
DB search
MPLFAQNPFDQDVDKATNENNTTDDWGLIMDICDKIGTTSNGPKDSLRSIMKRVNHKVPH
VAMQALNLLGACVSNCGKIFHLEICSREFASEVRSVLSRAHPKVCEKLKALMVEWAEDFQ
KDPQLSLIGATIKSLKEDGITFPTSSQGSTTKVSTPAASKALDDDDLAKAIELSLQEQKQ
QAETRPLTMTSDPPSYTNGGGGQEVRKVRALYDFEAAEDNELTFKTGELILVLDDSDPNW
WKGENHRGVGLFPSNFVTTNLNAEPEPAAYVEKTASPEETCLETKVEPEPVFIDEGKMDK
TLALLQNADPADPAPDSPELIQLEGACEQMNPMIDEKLEEIDRKHSELSELNVKVLEALE
LYNKLMNEAPFYSSYSKMQPQYAPSSSAVAMQGYLGPAGGPYLPPAMPQVPAIQPYGLPS
DQPGPLHSLPPNVSAPPNSQAAQPPYMSGGMNTQYMNQAAGASYPPQAGVAMDMSTYHNS
SMPPVSYPMAAPPHQAPQQQQAAYYQQPLL
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgcctttatttgcccaaaatccatttgaccaagatgttgacaaggcaaccaatgaaaac
aacacaacagatgactgggggctcattatggacatctgcgataagattgggacaacatcc
aatggaccaaaggacagcttgagatccattatgaagagagtcaaccacaaagtacctcat
gttgccatgcaagctcttaatttgcttggtgcttgtgtgtcaaactgtggcaaaatattc
cacttggaaatctgttcaagggagtttgccagtgaagtacggagtgtgctgagcagggcc
caccctaaggtgtgtgaaaagctaaaggctctgatggtggagtgggcagaagacttccag
aaggatccacaacttagtctaattggtgctaccatcaagtctttgaaagaggacggcatc
accttccccacatcctcacaggggtctaccacaaaggtcagcacaccagctgcgagcaaa
gcattggatgatgacgacctagccaaagccattgagctgtccttgcaggagcagaagcag
caggcagagacacggcccttgaccatgacctctgatcccccaagctacaccaatggtgga
ggggggcaggaggtccgtaaagtgcgtgcactgtatgactttgaggctgctgaagataat
gagttgaccttcaaaactggagaactaattctggttttggatgacagcgatccaaattgg
tggaaaggagagaaccacagaggagtgggtcttttcccctccaactttgtcacaaccaat
ctcaatgctgaaccggagccggcggcttatgttgaaaagacagccagtcctgaagagaca
tgcctggaaaccaaagttgagcctgagcccgtcttcatagatgaggggaagatggacaaa
acgctggcactgctgcagaatgcagatcctgcagatccagctcctgactccccagagctg
atccagctggagggtgcatgtgaacagatgaacccgatgattgatgagaagctggaggag
attgacaggaaacactcagagctgtcagagttgaatgtgaaagttttggaggccctggag
ctttacaacaagctcatgaacgaggctccattctactcatcctactccaagatgcaacca
cagtatgcaccatccagctcagctgtggccatgcagggctacctcggaccggctggtggt
ccctacctgcctccagcgatgccccaagttcccgccatacagccttatggtctgcccagc
gaccagcccggaccactgcattcactgcctcccaatgtttcagccccacccaacagccaa
gctgctcagcccccttacatgagcggtggtatgaacactcagtacatgaaccaagctgct
ggagcttcatacccaccccaggcaggtgtggccatggacatgtcaacttatcacaactct
agcatgcctcctgtgtcctatcctatggctgctccccctcaccaggctcctcaacagcag
caggcagcatattatcaacagcctctgctgtaa
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